Hi,
Has anyone encountered this before? I have a few volumes for which
mri_watershed output volumes are fine apart from some non-zero voxels
near the edges (which are not connected to the brain). The volumes are
in transverse format and the most noticeable effect is some inferior
slices (neck, lower jaw) which are not being masked out, though there
are also some voxels close to the coronal edges. For both sets of edges
there is a one or two voxel thick layer parallel to either the coronal
or transverse plane.
This is with Freesurfer 4.0.2, T1 images in Analyze format.
Thanks for your time,
Ian Malone
_______________________________________________
Freesurfer mailing list
Freesurfer@nmr.mgh.harvard.edu
https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
