First, if this shows up twice, let m apologise for mixing up my email
addresses...
Aloha fellow surfers,
I just installed ftp://surfer.nmr.mgh.harvard.edu/pub/dist/freesurfer-Darwin-leopard-i686-stable-pub-v4.0.5-full.dmg
on my:
intel macbook, running 10.5.3 with 4GB of RAM. A few observations:
1) minor: freeview does not seem to be part of the dmg, probably
expected, but from the release notes it is not obvious, whether the
macos version should contain it or not
2) minor, minor: it seems like the whole macos version is built for
32bit only (at least that is what "file `which mri_convert`" and a few
other binaries tell me); would it be possible to have a 64bit built
(than my macbook might suffice for surface reconstruction as well).
3) scuba dies horribly (tkmedit and tksurfer, however seem to work, at
least they start up and display something), here is the problem report:
Path: /opt/freesurfer//bin/scuba.bin
Identifier: scuba.bin
Version: ??? (???)
Code Type: X86 (Native)
Parent Process: tcsh [18243]
Date/Time: 2008-06-18 10:10:42.832 +0200
OS Version: Mac OS X 10.5.3 (9D34)
Report Version: 6
Exception Type: EXC_BAD_ACCESS (SIGBUS)
Exception Codes: KERN_PROTECTION_FAILURE at 0x0000000000000000
Crashed Thread: 0
Thread 0 Crashed:
0 scuba.bin 0x001e5764 0x1000 + 1984356
1 dyld 0x8fe0e723
ImageLoader::recursiveInitialization(ImageLoader::LinkContext const&,
unsigned int) + 307
2 dyld 0x8fe0e809
ImageLoader::runInitializers(ImageLoader::LinkContext const&) + 57
3 dyld 0x8fe04102
dyld::initializeMainExecutable() + 146
4 dyld 0x8fe07b5f dyld::_main(mach_header
const*, unsigned long, int, char const**, char const**, char const**)
+ 2975
5 dyld 0x8fe01872
dyldbootstrap::start(mach_header const*, int, char const**, long) + 818
6 dyld 0x8fe01037 _dyld_start + 39
Thread 0 crashed with X86 Thread State (32-bit):
eax: 0x00000000 ebx: 0x001e570c ecx: 0x00000002 edx: 0x00000000
edi: 0x00000026 esi: 0x00001000 ebp: 0xbfffd548 esp: 0xbfffd4c0
ss: 0x0000001f efl: 0x00010282 eip: 0x001e5764 cs: 0x00000017
ds: 0x0000001f es: 0x0000001f fs: 0x00000000 gs: 0x00000037
cr2: 0x00000000
Binary Images:
0x1000 - 0x23ffed +scuba.bin ??? (???)
<d06ab65353013407522c78a886efea54> /opt/freesurfer/bin/scuba.bin
0x2af000 - 0x35ffe9 +libGLU.1.dylib ??? (???) /usr/X11/lib/libGLU.
1.dylib
0x37a000 - 0x38efe7 +libXmu.6.dylib ??? (???)
<4368a7afa86da654c52e64ba19a9097b> /usr/X11/lib/libXmu.6.dylib
0x397000 - 0x3e2ff8 +libXt.6.dylib ??? (???)
<d700ce75d38c60146177b10c3883f10d> /usr/X11/lib/libXt.6.dylib
0x3f7000 - 0x3fcffc +libSM.6.dylib ??? (???)
<1a5a19fa53bdce9d344782a05db3c4e7> /usr/X11/lib/libSM.6.dylib
0x402000 - 0x413ff7 +libICE.6.dylib ??? (???)
<0ed3bdd6f53b07a00ef27fc3577f283a> /usr/X11/lib/libICE.6.dylib
0x41c000 - 0x428ffa +libXext.6.dylib ??? (???)
<a94a1adf7793da948691b99b4777e2e1> /usr/X11/lib/libXext.6.dylib
0x430000 - 0x51bfe7 +libX11.6.dylib ??? (???)
<cc5a62e8982326ffe327eafb901129d3> /usr/X11/lib/libX11.6.dylib
0x53d000 - 0x53ffef +libXdmcp.6.dylib ??? (???)
<6f2b16b27bab3a08bd635d8e56bfe9f6> /usr/X11/lib/libXdmcp.6.dylib
0x544000 - 0x544ff1 +libXau.6.dylib ??? (???)
<cd091bf5ae82c18ee03a9b4f6bb93d57> /usr/X11/lib/libXau.6.dylib
0x549000 - 0x596fe7 +libGL.1.dylib ??? (???)
<f96baeea46fa05910212d7427da5f33a> /usr/X11/lib/libGL.1.dylib
0x5c3000 - 0x5cefeb libXplugin.1.dylib ??? (???)
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0x5d7000 - 0x5edfe7 com.apple.CoreVideo 1.5.1 (1.5.1)
<ed7bb95fb94817ea3212090aac5c65f3> /System/Library/Frameworks/
CoreVideo.framework/Versions/A/CoreVideo
0xa000000 - 0xa07cfef +libtcl8.4.dylib ??? (???) /opt/freesurfer/lib/
tcltktixblt/lib/libtcl8.4.dylib
0xb000000 - 0xb0a4fff +libtk8.4.dylib ??? (???)
<09a6ab5749f362ad8838bfe610a8f33f> /opt/freesurfer/lib/tcltktixblt/lib/
libtk8.4.dylib
0x8fe00000 - 0x8fe2da53 dyld 96.2 (???)
<5013f43c4d2c33c9619011f103ec3238> /usr/lib/dyld
0x90003000 - 0x902ddff3 com.apple.CoreServices.CarbonCore 786.4
(786.4) <059c4803a7a95e3c1a95a332baeb1edf> /System/Library/Frameworks/
CoreServices.framework/Versions/A/Frameworks/CarbonCore.framework/
Versions/A/CarbonCore
0x90462000 - 0x905c2ff3 libSystem.B.dylib ??? (???)
<a12f397abf2285077b89bd726bff5b18> /usr/lib/libSystem.B.dylib
0x90666000 - 0x90666ffa com.apple.CoreServices 32 (32)
<2760719f7a81e8c2bdfd15b0939abc29> /System/Library/Frameworks/
CoreServices.framework/Versions/A/CoreServices
0x907ee000 - 0x907f5ffe libbsm.dylib ??? (???)
<5582985a86ea36504cca31788bccf963> /usr/lib/libbsm.dylib
0x90941000 - 0x90941ffb com.apple.installserver.framework 1.0 (8) /
System/Library/PrivateFrameworks/InstallServer.framework/Versions/A/
InstallServer
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<9fde11f84a72e890bbf2aa8b0b13b79a> /System/Library/Frameworks/
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<475db64244e011cd8811e076035b2632> /System/Library/Frameworks/
OpenGL.framework/Versions/A/Libraries/libGLProgrammability.dylib
0x911e3000 - 0x911e4ffc libffi.dylib ??? (???)
<596e0dbf626b211741cecaa9698f271b> /usr/lib/libffi.dylib
0x911e5000 - 0x91212feb libvDSP.dylib ??? (???)
<2ee4eb005babc90eaa352b33eb09226e> /System/Library/Frameworks/
Accelerate.framework/Versions/A/Frameworks/vecLib.framework/Versions/A/
libvDSP.dylib
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<d0da935e781446faa4563e7a9c587cce> /System/Library/Frameworks/
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0x91243000 - 0x91247fff libmathCommon.A.dylib ??? (???) /usr/lib/
system/libmathCommon.A.dylib
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Versions/A/Resources/libTIFF.dylib
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<d6efc4827b91e646965d15c409a6610f> /System/Library/Frameworks/
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<2072d673706bbe463ed2426af57a28d7> /usr/lib/libauto.dylib
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libobjc.A.dylib
0xffff0000 - 0xffff1780 libSystem.B.dylib ??? (???) /usr/lib/
libSystem.B.dylib
--
Sebastian Moeller
Tel.: 04 21 - 2 18 - 78 38 oder 96 91
Fax.: 04 21 - 2 18 - 90 04
GSM: 0 15 77 - 1 90 31 41
[EMAIL PROTECTED]
AG Kreiter / FB 2
Institut fuer Hirnforschung III
Abteilung Theoretische Neurobiologie
Universitaet Bremen
Biogarten
Hochschulring 16a
Postfach 33 04 40
28359 Bremen
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