I re-installed the dell-nvidia driver (original with system).
Some new behavior observed with bert:
tksurfer bert lh pial yields a complete "bert" window (entire pial surface is
displayed). However, the lower window "TkSurfer Tools" is not visible.
Also, tkmedit bert norm.mgz fails to launch a display, simply returns a command
prompt.
I've pasted the screen output for tksurfer below:
Any ideas are greatly appreciated.
[EMAIL PROTECTED] subjects]$ tksurfer bert lh pial
surfer: current subjects dir: /usr/local/freesurfer/subjects
surfer: not in "scripts" dir ==> using cwd for session root
surfer: session root data dir ($session) set to:
surfer: /usr/local/freesurfer/subjects
surfer: Reading header info from /usr/local/freesurfer/subjects/bert/mri/T1.mgz
surfer: vertices=131168, faces=262332
Loading /usr/local/freesurfer/surface_labels.txt
surfer: ### redraw failed: no gl window open
surfer: single buffered window
surfer: tkoInitWindow(bert)
Tk_Init failed: this isn't a Tk applicationunknown color name "Black"
Tix_Init failed: this isn't a Tk applicationunknown color name "Black"
surfer: using interface /usr/local/freesurfer/lib/tcl/tksurfer.tcl
Reading /usr/local/freesurfer/lib/tcl/tkm_common.tcl
Reading /usr/local/freesurfer/lib/tcl/tkm_wrappers.tcl
Reading /usr/local/freesurfer/lib/tcl/fsgdfPlot.tcl
Error sourcing /usr/local/freesurfer/lib/tcl/tksurfer.tcl:
this isn't a Tk applicationunknown color name "Black"
surfer: Error sending tcl command tkm_SetEnableGroupStatus
mg_InflatedVSetLoaded 0:
can't read "glEnableGroups(mg_InflatedVSetLoaded)": no such variable
surfer: Error sending tcl command tkm_SetEnableGroupStatus mg_PialVSetLoaded 0:
can't read "glEnableGroups(mg_PialVSetLoaded)": no such variable
surfer: Error sending tcl command tkm_SetEnableGroupStatus mg_TimeCourseLoaded
0:
can't read "glEnableGroups(mg_TimeCourseLoaded)": no such variable
surfer: Error sending tcl command tkm_SetEnableGroupStatus mg_OverlayLoaded 0:
can't read "glEnableGroups(mg_OverlayLoaded)": no such variable
surfer: Error sending tcl command tkm_SetEnableGroupStatus mg_CurvatureLoaded 0:
can't read "glEnableGroups(mg_CurvatureLoaded)": no such variable
surfer: Error sending tcl command tkm_SetEnableGroupStatus mg_LabelLoaded 0:
can't read "glEnableGroups(mg_LabelLoaded)": no such variable
surfer: Error sending tcl command tkm_SetEnableGroupStatus mg_FieldSignLoaded 0:
can't read "glEnableGroups(mg_FieldSignLoaded)": no such variable
surfer: Error sending tcl command tkm_SetEnableGroupStatus mg_FieldMaskLoaded 0:
can't read "glEnableGroups(mg_FieldMaskLoaded)": no such variable
surfer: Error sending tcl command UpdateUndoItemLabel "Nothing to Undo":
invalid command name "UpdateUndoItemLabel"
surfer: Error sending tcl command tkm_SetEnableGroupStatus
mg_OriginalVSetLoaded 1:
can't read "glEnableGroups(mg_OriginalVSetLoaded)": no such variable
surfer: Error sending tcl command LblLst_SetStructures { 0 Unknown 1
G_cingularis 2 G_cuneus 3 G_frontalis_inf-pars_opercularis 4
G_frontalis_inf-pars_orbitalis 5 G_frontalis_inf-pars_triangularis 6
G_frontalis_medius 7 G_frontalis_sup-pars_lateralis 8
G_frontalis_sup-pars_medialis 9 G_frontomarginalis 10 G_hippocampi 11
G_insularis_breves 12 G_occipitalis_inf 13 G_occipitalis_medius-pars_inf 14
G_occipitalis_medius-pars_sup 15 G_occipitalis_sup 16 G_lateralis 17
G_lingualis 18 G_parahippocampi 19 G_orbitalis 20 G_paracentralis 21
G_parietalis_inf-pars_angularis 22 G_parietalis_inf-pars_supramarginalis 23
G_parietalis_sup 24 G_postcentralis 25 G_precentralis 26 G_precuneus 27
G_rectus_and_S_orbitalis_medialis 28 G_rectus_and_S_orbitalis_medialis2 29
G_subcentralis 30 G_supracingularis 31 G_temporalis_transversalis 32
G_temporalis_inf 33 G_temporalis_medius 34 G_temporalis_sup-pars_lateralis 35
G_temporalis_sup-planum_polare 36 G_temporalis_sup-planum_temporale 37
Plica_falci!
formis 38 Polus_occipitalis 39 Polus_temporalis 40 S_temporalis_transversalis
42 S_angularis 43 S_calcarinus 44 S_centralis_insulae_&_G_insularis_longus 46
S_centralis 47 S_cingularis 48 S_cingularis-pars_marginalis 49
S_circularis_insulae_ant 50 S_circularis_insulae_inf 51
S_circularis_insulae_sup 52 S_corpori_callosi 53 S_diagonalis 54
S_frontalis_inf 55 S_frontalis_medialis 56 S_frontalis_medius 57
S_frontalis_sup 58 S_frontomarginalis 59 S_intermedius_primus 60
S_intermedius_secundus 61 S_intracingularis 62 S_intraoccipitalis_medius 63
S_intraoccipitotemporalis_lateralis 64 S_intraparietalis 65
S_lateralis-pars_ant-ramus_horizontalis 66
S_lateralis-pars_ant-ramus_verticalis 67 S_lateralis-pars_horizontalis 68
S_lateralis-pars_post 69 S_lunatus 70 S_occipitalis_ant 71 S_occipitalis_inf 72
S_occipitalis_medius 73 S_occipitalis_sup 74 S_occipitalis_transversalis 75
S_occipitopolaris 76 S_occipitotemporalis_lateralis 77
S_occipitotemporalis_medialis 78 S_orbitales 79 S_orbi!
talis_lateralis 80 S_paracalcarinus 81 S_paracentralis 82 S_parietalis
_transversalis 83 S_parieto_occipitalis 84 S_postcentralis 85 S_precentralis 86
S_retrocalcarinus 87 S_rhinalis 88 S_subcentralis_ant_&_post_ 89 S_suborbitalis
90 S_subparietalis 91 S_supracingularis 92 S_temporalis_inf 93 S_temporalis_sup
94 S_triangularis }:
invalid command name "LblLst_SetStructures"
reading white matter vertex locations...
surfer: Error sending tcl command tkm_SetEnableGroupStatus mg_WhiteVSetLoaded 1:
can't read "glEnableGroups(mg_WhiteVSetLoaded)": no such variable
surfer: Error sending tcl command UpdateLinkedVarGroup all:
invalid command name "UpdateLinkedVarGroup"
% surfer: Error sending tcl command MoveToolWindow 663 681:
invalid command name "MoveToolWindow"
surfer: Error sending tcl command MoveToolWindow 664 681:
invalid command name "MoveToolWindow"
surfer: Error sending tcl command MoveToolWindow 666 681:
invalid command name "MoveToolWindow"
surfer: Error sending tcl command MoveToolWindow 667 681:
invalid command name "MoveToolWindow"
surfer: Error sending tcl command MoveToolWindow 669 681:
invalid command name "MoveToolWindow"
surfer: Error sending tcl command MoveToolWindow 671 681:
invalid command name "MoveToolWindow"
surfer: Error sending tcl command MoveToolWindow 675 681:
invalid command name "MoveToolWindow"
surfer: Error sending tcl command MoveToolWindow 675 681:
invalid command name "MoveToolWindow"
surfer: Error sending tcl command MoveToolWindow 683 684:
invalid command name "MoveToolWindow"
surfer: Error sending tcl command MoveToolWindow 691 684:
invalid command name "MoveToolWindow"
surfer: Error sending tcl command MoveToolWindow 703 690:
invalid command name "MoveToolWindow"
surfer: Error sending tcl command MoveToolWindow 705 690:
invalid command name "MoveToolWindow"
surfer: Error sending tcl command MoveToolWindow 713 690:
invalid command name "MoveToolWindow"
surfer: Error sending tcl command MoveToolWindow 727 694:
invalid command name "MoveToolWindow"
surfer: Error sending tcl command MoveToolWindow 729 694:
invalid command name "MoveToolWindow"
surfer: Error sending tcl command MoveToolWindow 739 694:
invalid command name "MoveToolWindow"
surfer: Error sending tcl command MoveToolWindow 740 694:
invalid command name "MoveToolWindow"
surfer: Error sending tcl command MoveToolWindow 743 694:
invalid command name "MoveToolWindow"
surfer: Error sending tcl command MoveToolWindow 753 694:
invalid command name "MoveToolWindow"
surfer: Error sending tcl command MoveToolWindow 756 694:
invalid command name "MoveToolWindow"
surfer: Error sending tcl command MoveToolWindow 766 694:
invalid command name "MoveToolWindow"
surfer: Error sending tcl command MoveToolWindow 774 694:
invalid command name "MoveToolWindow"
surfer: Error sending tcl command MoveToolWindow 790 694:
invalid command name "MoveToolWindow"
surfer: Error sending tcl command MoveToolWindow 793 694:
invalid command name "MoveToolWindow"
surfer: Error sending tcl command MoveToolWindow 813 694:
invalid command name "MoveToolWindow"
surfer: Error sending tcl command MoveToolWindow 813 694:
invalid command name "MoveToolWindow"
surfer: Error sending tcl command MoveToolWindow 829 696:
invalid command name "MoveToolWindow"
surfer: Error sending tcl command MoveToolWindow 845 696:
invalid command name "MoveToolWindow"
surfer: Error sending tcl command MoveToolWindow 848 696:
invalid command name "MoveToolWindow"
surfer: Error sending tcl command MoveToolWindow 851 696:
invalid command name "MoveToolWindow"
surfer: Error sending tcl command MoveToolWindow 852 696:
invalid command name "MoveToolWindow"
surfer: Error sending tcl command MoveToolWindow 855 696:
invalid command name "MoveToolWindow"
surfer: Error sending tcl command MoveToolWindow 856 695:
invalid command name "MoveToolWindow"
surfer: Error sending tcl command MoveToolWindow 860 695:
invalid command name "MoveToolWindow"
surfer: Error sending tcl command MoveToolWindow 862 695:
invalid command name "MoveToolWindow"
surfer: Error sending tcl command MoveToolWindow 866 695:
invalid command name "MoveToolWindow"
surfer: Error sending tcl command MoveToolWindow 868 695:
invalid command name "MoveToolWindow"
surfer: Error sending tcl command MoveToolWindow 874 695:
invalid command name "MoveToolWindow"
surfer: Error sending tcl command MoveToolWindow 876 695:
invalid command name "MoveToolWindow"
surfer: Error sending tcl command MoveToolWindow 878 695:
invalid command name "MoveToolWindow"
surfer: Error sending tcl command MoveToolWindow 884 695:
invalid command name "MoveToolWindow"
surfer: Error sending tcl command MoveToolWindow 887 695:
invalid command name "MoveToolWindow"
surfer: Error sending tcl command MoveToolWindow 892 695:
invalid command name "MoveToolWindow"
surfer: Error sending tcl command MoveToolWindow 894 695:
invalid command name "MoveToolWindow"
surfer: Error sending tcl command MoveToolWindow 896 695:
invalid command name "MoveToolWindow"
surfer: Error sending tcl command MoveToolWindow 899 695:
invalid command name "MoveToolWindow"
surfer: Error sending tcl command MoveToolWindow 901 694:
invalid command name "MoveToolWindow"
surfer: Error sending tcl command MoveToolWindow 902 694:
invalid command name "MoveToolWindow"
surfer: Error sending tcl command MoveToolWindow 905 694:
invalid command name "MoveToolWindow"
surfer: Error sending tcl command MoveToolWindow 906 694:
invalid command name "MoveToolWindow"
surfer: Error sending tcl command MoveToolWindow 908 694:
invalid command name "MoveToolWindow"
surfer: Error sending tcl command MoveToolWindow 910 694:
invalid command name "MoveToolWindow"
surfer: Error sending tcl command MoveToolWindow 911 693:
invalid command name "MoveToolWindow"
surfer: Error sending tcl command MoveToolWindow 916 693:
invalid command name "MoveToolWindow"
surfer: Error sending tcl command MoveToolWindow 917 692:
invalid command name "MoveToolWindow"
surfer: Error sending tcl command MoveToolWindow 919 692:
invalid command name "MoveToolWindow"
surfer: Error sending tcl command MoveToolWindow 922 691:
invalid command name "MoveToolWindow"
surfer: Error sending tcl command MoveToolWindow 923 690:
invalid command name "MoveToolWindow"
surfer: Error sending tcl command MoveToolWindow 926 689:
invalid command name "MoveToolWindow"
surfer: Error sending tcl command MoveToolWindow 927 689:
invalid command name "MoveToolWindow"
surfer: Error sending tcl command MoveToolWindow 928 688:
invalid command name "MoveToolWindow"
surfer: Error sending tcl command MoveToolWindow 931 687:
invalid command name "MoveToolWindow"
surfer: Error sending tcl command MoveToolWindow 932 686:
invalid command name "MoveToolWindow"
surfer: Error sending tcl command MoveToolWindow 933 686:
invalid command name "MoveToolWindow"
surfer: Error sending tcl command MoveToolWindow 934 686:
invalid command name "MoveToolWindow"
surfer: Error sending tcl command MoveToolWindow 934 685:
invalid command name "MoveToolWindow"
surfer: Error sending tcl command MoveToolWindow 935 685:
invalid command name "MoveToolWindow"
surfer: Error sending tcl command MoveToolWindow 935 685:
invalid command name "MoveToolWindow"
surfer: Error sending tcl command MoveToolWindow 935 685:
invalid command name "MoveToolWindow"
surfer: Error sending tcl command MoveToolWindow 935 685:
invalid command name "MoveToolWindow"
surfer: Error sending tcl command MoveToolWindow 935 685:
invalid command name "MoveToolWindow"
surfer: Error sending tcl command MoveToolWindow 935 685:
invalid command name "MoveToolWindow"
surfer: Error sending tcl command MoveToolWindow 935 685:
invalid command name "MoveToolWindow"
surfer: Error sending tcl command MoveToolWindow 935 685:
invalid command name "MoveToolWindow"
surfer: Error sending tcl command MoveToolWindow 935 685:
invalid command name "MoveToolWindow"
surfer: Error sending tcl command MoveToolWindow 935 685:
invalid command name "MoveToolWindow"
surfer: Error sending tcl command MoveToolWindow 935 685:
invalid command name "MoveToolWindow"
surfer: Error sending tcl command MoveToolWindow 935 685:
invalid command name "MoveToolWindow"
surfer: Error sending tcl command MoveToolWindow 935 685:
invalid command name "MoveToolWindow"
surfer: Error sending tcl command MoveToolWindow 935 685:
invalid command name "MoveToolWindow"
surfer: Error sending tcl command MoveToolWindow 935 685:
invalid command name "MoveToolWindow"
surfer: Error sending tcl command MoveToolWindow 935 685:
invalid command name "MoveToolWindow"
surfer: Error sending tcl command MoveToolWindow 935 685:
invalid command name "MoveToolWindow"
surfer: Error sending tcl command MoveToolWindow 935 685:
invalid command name "MoveToolWindow"
surfer: Error sending tcl command MoveToolWindow 935 685:
invalid command name "MoveToolWindow"
surfer: Error sending tcl command MoveToolWindow 935 685:
invalid command name "MoveToolWindow"
surfer: Error sending tcl command MoveToolWindow 935 685:
invalid command name "MoveToolWindow"
surfer: Error sending tcl command MoveToolWindow 935 685:
invalid command name "MoveToolWindow"
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