Hi,
i can not see the pial surface using tksurfer. i´m using Fedora core 7, 64
bits, with version:
freesurfer-Linux-centos4_x86_64-stable-pub-v4.0.3-full.tar.gz<ftp://surfer.nmr.mgh.harvard.edu/pub/dist/freesurfer-Linux-centos4_x86_64-stable-pub-v4.0.3-full.tar.gz>,
with nvidia card.
when i enter:
ldd /usr/local/freesurfer/bin/tksurfer.bin
i get:
linux-vdso.so.1 => (0x00007fff463fd000)
libtix8.1.8.4.so => not found
libtk8.4.so => /usr/lib64/libtk8.4.so (0x0000003678a00000)
libtcl8.4.so => /usr/lib64/libtcl8.4.so (0x0000003678600000)
libGLU.so.1 => /usr/lib64/libGLU.so.1 (0x00002aaaaaaca000)
libXmu.so.6 => /usr/lib64/libXmu.so.6 (0x0000003c35600000)
libGL.so.1 => /usr/lib64/libGL.so.1 (0x0000003c2d200000)
libXext.so.6 => /usr/lib64/libXext.so.6 (0x0000003c28400000)
libX11.so.6 => /usr/lib64/libX11.so.6 (0x0000003c27c00000)
libexpat.so.0 => /lib64/libexpat.so.0 (0x0000003c28800000)
libjpeg.so.62 => /usr/lib64/libjpeg.so.62 (0x0000003c2f200000)
libtiff.so.3 => /usr/lib64/libtiff.so.3 (0x000000367e800000)
libz.so.1 => /lib64/libz.so.1 (0x0000003c26400000)
libcrypt.so.1 => /lib64/libcrypt.so.1 (0x0000003c38200000)
libdl.so.2 => /lib64/libdl.so.2 (0x0000003c26000000)
libpthread.so.0 => /lib64/libpthread.so.0 (0x0000003c26c00000)
libstdc++.so.6 => /usr/lib64/libstdc++.so.6 (0x0000003ed0a00000)
libm.so.6 => /lib64/libm.so.6 (0x0000003ed0e00000)
libgcc_s.so.1 => /lib64/libgcc_s.so.1 (0x0000003c33200000)
libc.so.6 => /lib64/libc.so.6 (0x0000003c25800000)
libXt.so.6 => /usr/lib64/libXt.so.6 (0x0000003c38e00000)
libXxf86vm.so.1 => /usr/lib64/libXxf86vm.so.1 (0x0000003c3ae00000)
libdrm.so.2 => /usr/lib64/libdrm.so.2 (0x0000003c2d600000)
libXau.so.6 => /usr/lib64/libXau.so.6 (0x0000003c27400000)
libXdmcp.so.6 => /usr/lib64/libXdmcp.so.6 (0x0000003c27000000)
/lib64/ld-linux-x86-64.so.2 (0x0000003c25400000)
libSM.so.6 => /usr/lib64/libSM.so.6 (0x0000003c2fa00000)
libICE.so.6 => /usr/lib64/libICE.so.6 (0x0000003c30200000)
starting tksurfer:
[EMAIL PROTECTED] subjects]$ tksurfer bert rh pial
gives:
surfer: current subjects dir: /usr/local/freesurfer/subjects
surfer: not in "scripts" dir ==> using cwd for session root
surfer: session root data dir ($session) set to:
surfer: /usr/local/freesurfer/subjects
surfer: Reading header info from
/usr/local/freesurfer/subjects/bert/mri/T1.mgz
surfer: vertices=131277, faces=262550
Loading /usr/local/freesurfer/surface_labels.txt
surfer: ### redraw failed: no gl window open
surfer: single buffered window
surfer: using interface /usr/local/freesurfer/lib/tcl/tksurfer.tcl
Reading /usr/local/freesurfer/lib/tcl/tkm_common.tcl
Reading /usr/local/freesurfer/lib/tcl/tkm_wrappers.tcl
Reading /usr/local/freesurfer/lib/tcl/fsgdfPlot.tcl
Reading /usr/local/freesurfer/lib/tcl/tkUtils.tcl
Successfully parsed tksurfer.tcl
reading white matter vertex locations...
can you help?
thanks!
-joost
On Fri, Apr 25, 2008 at 4:05 PM, Nick Schmansky <[EMAIL PROTECTED]>
wrote:
> If you have an Nvidia graphics card, you will need to update the driver.
>
> Try running nvidia-installer --update, as root (preferably have your
> sysadmin do this).
>
> Nick
>
> On Fri, 2008-04-25 at 21:25 +0800, yczhang wrote:
> > Hi,
> > when I launched the command tksurfer to see the constructed pial
> > surface,
> > only a very small part of the surface can been seen in the window.
> > I do not know how to fix the problem.
> > Thanks!
> >
> >
> > ______________________________________________________________________
> > yczhang
> > 2008-04-25
> > _______________________________________________
> > Freesurfer mailing list
> > Freesurfer@nmr.mgh.harvard.edu
> > https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
>
> _______________________________________________
> Freesurfer mailing list
> Freesurfer@nmr.mgh.harvard.edu
> https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
>
_______________________________________________
Freesurfer mailing list
Freesurfer@nmr.mgh.harvard.edu
https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
