you might try -it ge or -it gelx
doug
[EMAIL PROTECTED] wrote:
Is it a dicom? Try
mri_convert -i 12461.spgr -o 12461.mgz -it dicom
It did not work either, unfortunately.
- Anders
doug
[EMAIL PROTECTED] wrote:
What's your cmd line and what exactly is the problem?
doug
Hi, the commands and problems are pasted below.
Thanks,
Anders
[EMAIL PROTECTED] folder]# cat $FREESURFER_HOME/build-stamp.txt
freesurfer-Linux-centos4_x86_64-stable-pub-v4.0.1
[EMAIL PROTECTED] folder]#
[EMAIL PROTECTED] raw]# mri_convert -i 12461.spgr -o 12461.mgz
mri_convert -i 12461.spgr -o 12461.mgz
file not found or unknown file type for file 12461.spgr
[EMAIL PROTECTED] raw]# mri_convert -it ge -i 12461.spgr -ot mgz -o
12461.mgz
mri_convert -it ge -i 12461.spgr -ot mgz -o 12461.mgz
$Id: mri_convert.c,v 1.146 2007/07/26 19:26:26 greve Exp $
reading from 12461.spgr...
genesisRead(): can't determine file name format for
/usit/psi-brain/u1/Felles/labdata/lab-data/multisample/folder/raw/12461.spgr
[EMAIL PROTECTED] raw]# mri_info 12461.spgr
ERROR: could not determine type of 12461.spgr
We have also tried to replace -it ge with gelx, ximg, and brik, with the
same result.
[EMAIL PROTECTED] wrote:
Hi, we have problems converting scans obtained from a GE scanner with a
T1-weighted 3-D spoiled gradient recalled (SPGR) sequence to anything
freesurfer can read.
Any tips?
Thanks!
- Anders
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--
Douglas N. Greve, Ph.D.
MGH-NMR Center
[EMAIL PROTECTED]
Phone Number: 617-724-2358
Fax: 617-726-7422
In order to help us help you, please follow the steps in:
surfer.nmr.mgh.harvard.edu/fswiki/BugReporting
--
Douglas N. Greve, Ph.D.
MGH-NMR Center
[EMAIL PROTECTED]
Phone Number: 617-724-2358
Fax: 617-726-7422
In order to help us help you, please follow the steps in:
surfer.nmr.mgh.harvard.edu/fswiki/BugReporting
--
Douglas N. Greve, Ph.D.
MGH-NMR Center
[EMAIL PROTECTED]
Phone Number: 617-724-2358
Fax: 617-726-7422
In order to help us help you, please follow the steps in:
surfer.nmr.mgh.harvard.edu/fswiki/BugReporting
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