hmm, not sure what happened on the 2nd run, but you should be able to
corect those problems by putting some control points in superior regions
(in the white matter at the base of the strands that are lost). Make sure
they are completely in the wm and not in partial-volumed voxels.
Bruce
On Thu, 25
Oct 2007 [EMAIL PROTECTED] wrote:
Hi,
I did some editing, add in control points and edit pial surface on one set
of our data on the left hand side of the screenshot attached, and re-run
recon-all -autorecon2 -autorecon3 -s subjID
The result turned out to be wrong as shown in the right hand side of the
screenshot. The algorithm worked well at the temporal lobe where control
points were added, but it failed at the superior part. Can you suggest why
it is so? Thanks
Zheng Hui
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