it looks good in both dev and std when I check it in tkregister..
I'm assuming it's a problem with tkmedit then?
On Tue, 21 Aug 2007, Doug Greve wrote:
Have you tried also looking at it with tkregister2?
tkregister2 --fstal --s OFRR78
Akram Bakkour wrote:
Hi,
Is the talairach read differently in std and in dev? When I check the
talairach on a single subject using tkmedit $s brain.mgz -main-transform
talairach.xfm it looks different if I'm in dev vs std.
so for example:
setenv $SUBJECTS_DIR /space/banzai/3/users/efenster/OFRR_processing
source /usr/local/freesurfer/nmr-std-env
tkmedit OFRR78 brain.mgz -main-transform talairach.xfm
it looks right vs
source /usr/local/freesurfer/nmr-dev-env
tkmedit OFRR78 brain.mgz -main-transform talairach.xfm
which looks different.
Is the dev today what is going to become std (stable4) tomorrow?
Thanks!
Akram.
--
Akram Bakkour
Gerontology Research Unit
149 13th Street, Suite 2691
Charlestown, MA 02129
tel: 617-726-5571
fax: 617-726-5760
web: http://www.dickersonlab.org
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