Hi Marcus,
I don't think that anyone is supporting the old freediffusion stream
anymore. You can try dt_recon (note it is not "dtrecon"). Run with
--help to get more info.
doug
Marcus Belke wrote:
Hi
we are currently working on the DTI data and we are
trying to
get the mc-step running using diff-flirt. it does not
work, although
the unpacking and the dtrecon seem to work fine.
I have attached the log-file and copied the error
message at the
bottom.
Can anyone help?
Thanks a lot!
Best regards,
Marcus
-------- ERROR MESSAGE--------
...
...
Registering volume 1
flirt -in ./tmp/diff-flirt-8311/f-001.img -ref
./tmp/diff-flirt-8311/f-000.img -out
./tmp/diff-flirt-8311/f-001.img
-omat ./tmp/diff2diff-001.mat -verbose 3 -dof 12
-searchrx -15 15
-searchry -15 15 -searchrz -15 15 -cost mutualinfo
-searchcost
mutualinfo -bins 256
WARNING!!!! Multiple image files detected:
./tmp/diff-flirt-8311/f-000.nii.gz
./tmp/diff-flirt-8311/f-000.img
./tmp/diff-flirt-8311/f-000.hdr
STOPPING PROGRAM
ERROR: flirt failed with status 1
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--
Douglas N. Greve, Ph.D.
MGH-NMR Center
[EMAIL PROTECTED]
Phone Number: 617-724-2358
Fax: 617-726-7422
In order to help us help you, please follow the steps in:
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