What is the error message when it crashes? How much memory does each node have? It should have at least 2GB.
On Mon, 2006-07-17 at 11:20 -1000, Renat Yakupov wrote: > Hello everybody, > > > > Does anybody run FreeSurfer on Linux clusters in general or Scyld > BeoWulf clusters in particular? Do you have any problems? > > We are having some problems running FreeSurfer on our cluster. Quite > often when we run autorecon2 stage on a compute node, it crashes. > Sometimes a node crashes very quickly, sometimes after hours of > processing. All of the 4 compute nodes that we have here have crashed. > And it is not hardware related, because I ran linpack on them for 50+ > hours in a row, and it was fine. > > Any ideas what might be causing it? Any suggestions? > > We run freesurfer-Linux-centos4_x86_64-stable-pub-v3.0.3-full.tar.gz > version, and here is `uname –a` output: > > Linux scyld.localdomain 2.4.21-37.EL.301r0072smp #1 SMP Wed Mar 1 > 04:09:49 EST 2006 x86_64 x86_64 x86_64 GNU/Linux > > Thank you. > > > > Regards, > > Renat. > > > _______________________________________________ > Freesurfer mailing list > Freesurfer@nmr.mgh.harvard.edu > https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer _______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
