Hi Sebastian,
why do you want to run mri_normalize on non-conformed volumes? It wasn't
really built for it.
Bruce
On Sun, 25 Jun 2006, Sebastian Moeller wrote:
Hi List,
as the subject line says I am having problems running mri_normalize (on suse
9.3 x86_64, freesurfer centos4 x86_64 3.0.2 release). When feeding in
slightly unconformed volumes (like 1mm isotropic 256 by 256 by 256 of type 3
(float)) mri_normalize's "-conform" argument fails (fully unconformed volumes
are no problem). The error message boils down to
MRInormGentlyFindControlPoints: unsupported src format 3" followed by
"MRI3dGentleNormalize failure! mri_ctrl=Null".
I just work around this by running a full mri_convert --conform on my
input file before running mri_normalize. Just a nit, specifying "-v" some
where else than at the end of the commandline easily produces segmentation
faults (probably because -v is "overloaded" to also expect Gx Gy Gz
arguments? the help is a bit terse)
Ahoi
Sebastian
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