As a follow up, I should say that once the data are "conformed" (ie,
the orig volume and after), you should not reorient. It will display
correctly, but it could mess up later parts of the stream. The input
can be oriented any way, as long as the orientation information in the
input file format is correct.
doug
On Thu, 27 Apr 2006, Doug Greve wrote:
No, tkmedit and the rest of freesurfer read in the orientation info
and adjust the display to assure that the subject's left side shows up
on the right ("radiological"), that superior is at the top, etc. As
long as the orientation info is correct ...
doug
On Thu, 27 Apr 2006, adam walczak wrote:
Hello,
I was wondering if FreeSurfer needed the data to be in a specific display
convention (neurological or radiological). I have to do some manipulation
of our images in order to get them in the correct space and was wondering
if the program needed the data in a specific display type to work properly.
I noticed that tkmedit displays in the radiological convention.
Thank you,
Adam
adam
---------------------------------
Yahoo! Messenger with Voice. PC-to-Phone calls for ridiculously low rates.
--
Douglas N. Greve, Ph.D.
MGH-NMR Center
[EMAIL PROTECTED]
Phone Number: 617-724-2358
Fax: 617-726-7422
In order to help us help you, please follow the steps in:
surfer.nmr.mgh.harvard.edu/fswiki/BugReporting
_______________________________________________
Freesurfer mailing list
Freesurfer@nmr.mgh.harvard.edu
https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
