oops, don't use that command line. It should have been
mris_convert -p rh.occip.patch.flat rh.occip.patch.flat.asc
On Wed, 29 Mar 2006, Dahlia Sharon
wrote:
Hi,
I'm trying to use mris_convert and am getting a segmentation fault error. The
precise steps are pasted below. Can anyone figure out why this is happening
now?
Thanks!
Dahlia.
mirabai:dahlia[81] setenv SUBJECTS_DIR ~/structurals/
mirabai:dahlia[82] nmrenv
-------- freesurfer-Linux-centos4-stable-v3.0.1c-20060329 --------
Setting up environment for FreeSurfer/FS-FAST (and FSL)
FREESURFER_HOME /usr/local/freesurfer/stable
FSFAST_HOME /usr/local/freesurfer/stable/fsfast
SUBJECTS_DIR /homes/6/dahlia/structurals/
FUNCTIONALS_DIR /usr/local/freesurfer/stable/sessions
MINC_BIN_DIR /usr/local/freesurfer/stable/mni/bin
MINC_LIB_DIR /usr/local/freesurfer/stable/mni/lib
PERL5LIB /usr/local/freesurfer/stable/mni/lib/perl5/5.8.0
GSL_DIR /usr/local/freesurfer/stable/lib/gsl
QTDIR /usr/local/freesurfer/stable/lib/qt
TCLLIBPATH /usr/local/freesurfer/stable/lib/tcltktixblt/lib
FSL_DIR /usr/local/freesurfer/stable/fsl
[mirabai:~] (nmr-std-env) cd structurals/subj06_bay2/surf/
[mirabai:surf] (nmr-std-env) mris_convert rh.occip.patch.flat
rh.occip.patch.flat.asc
Segmentation fault
[mirabai:surf] (nmr-std-env)
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