[Freesurfer] talairach transform with brain.mgz as input file

[Lars M. Rimol]

Hi,

After having redone mri_convert with an edited brain.mgz as input file, in order to improve the talairach transform, and after having changed the file names (brain.xfm -> talairach.xfm), should we then go to autorecon2? (or do we need to re-run some more scripts from autorecon1?)
 

 

--
yours,
Lars M. Rimol 

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