Re: [Freesurfer] Matlab conflicts with FS-FAST

[Doug Greve]

Hi Andy, I'm having a hard time debugging this because we don't have too many macs (and I don't know my way around the mac), so it may be a few more days (feel free to keep reminding me:). I'm guessing that it's the way that it's running a matlab script from the shell. Did you ever get your motion correction problem fixed? doug Andrew H Bell wrote: Hello, I'm having strange difficulties with FS-FAST and thought that someone out there might have some suggestions: Specifically - one problem I'm having is viewing the data with SLICEVIEW-SESS The error I get is below (I've pasted the output from the Matlab step on). I don't get this error when using an older version of matlab (which is no longer an option). Is there a way to override this "title" business? Thanks! Andy < M A T L A B > Copyright 1984-2005 The MathWorks, Inc. Version 7.0.4.352 (R14) Service Pack 2 January 29, 2005 Toolbox Path Cache read in 0.00 seconds. Warning: Duplicate directory name: /Users/bellah/matlab. MATLAB Path initialized in 0.06 seconds. To get started, type one of these: helpwin, helpdesk, or demo. For product information, visit www.mathworks.com. yvtitle = ruphert100-func_atlas-face_place-sig yakview: $Id: yakview.m,v 1.4 2003/09/29 00:53:22 greve Exp $ Base /Users/bellah/Documents/HMI_Data/AFNI_Data/Ruphert/face_place1_ru100/ruphert 100/bold/func_atlas//h-offset Overlay /Users/bellah/Documents/HMI_Data/AFNI_Data/Ruphert/face_place1_ru100/ruphert 100/bold/func_atlas//face_place/sig Hemodynamic Data Offset Raw Data RawFunc: Loading Base ... 1.52961 sec Making Base Mosaic ... 0.340587 sec Loading Overlay 1.11081 sec Making Overlay Mosaic ... 0.266878 sec ??? Error: <a href="">File: yak.m Line: 427 Column: 9</a> "title" previously appeared to be used as a function, conflicting with its use here as the name of a variable. A possible cause of this error is that you forgot to initialize the variable, or you have initialized it implicitly using load or eval. Error in ==> <a href="">yakview at 230</a> yak('init',s,'-Nnnc',Nnnc,'-h',hsa,'-dof',dof,... Andrew H. Bell, PhD Laboratory of Brain and Cognition National Institute of Mental Health 49 Convent Drive Building 49, RM 1B80 Bethesda, MD 20892 office: (301) 496-5625 ext.260 mobile: (202) 679-1279 [EMAIL PROTECTED] _______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer -- Douglas N. Greve, Ph.D. MGH-NMR Center [EMAIL PROTECTED] Phone Number: 617-724-2358 Fax: 617-726-7422

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