Dear Antao, Check the recent archives with the subject "make_average_subject error?" and the recent exchange with Nick. On Doug's advice, I added 'xv' to the beginning of each make_average* script
So, #!/bin/tcsh -efxv Instead of #!/bin/tcsh -ef This produced the output that allowed the freesurfer developers to pinpoint the error. Also on Doug's suggestion, try adding --debug to the make_average_subject command. Nick's recommendation a few posts ago fixed the problem that I was having on a fedora core 4 machine. Based on your initial post, we seem to have similar problems, so give the above suggestions a try. If needed, comment out the offending information in make_average_subject, make_average_volume, and make_average_surface as Nick suggested (if you receive the same error message that I received). Good luck. Brian -- Brian C. Schweinsburg, Ph.D. Assistant Adjunct Professor of Psychiatry University of California, San Diego Office: 858-552-8585 x6109 Cell: 858-354-3756 > From: Antao Du <[EMAIL PROTECTED]> > Date: Fri, 7 Oct 2005 17:27:41 -0700 > To: Nick Schmansky <[EMAIL PROTECTED]> > Cc: Freesurfer Mailing List <freesurfer@nmr.mgh.harvard.edu> > Subject: RE: [Freesurfer] RE: make_average_surface > > There is no any output when I add --echo. > > Antao > >> -----Original Message----- >> From: [EMAIL PROTECTED] >> [mailto:[EMAIL PROTECTED] Behalf Of Nick >> Schmansky >> Sent: Friday, October 07, 2005 3:04 PM >> To: Antao Du >> Cc: Freesurfer Mailing List >> Subject: Re: [Freesurfer] RE: make_average_surface >> >> >> Add --echo to the command to print its activity, and then send me the >> output. >> >> On Fri, 2005-10-07 at 15:00 -0700, Antao Du wrote: >>> Hi, When I run make_average_surface --subjects AD1293 AD1297 >> AD1299 --out >>> average_cn, it finished within 1 second without any output and any error >>> message. I don't know what is wrong. Any helps there? >>> >>> I have not updated my freesurface so I downloaded >> make_average_surface from >>> a post by Nick in July, 2005. >>> >>> Thanks, >>> >>> Antao >>> >>> _______________________________________________ >>> Freesurfer mailing list >>> Freesurfer@nmr.mgh.harvard.edu >>> https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer >>> >>> >> >> _______________________________________________ >> Freesurfer mailing list >> Freesurfer@nmr.mgh.harvard.edu >> https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer >> > > _______________________________________________ > Freesurfer mailing list > Freesurfer@nmr.mgh.harvard.edu > https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer _______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
