Hi,
I got an error when running recon-all -stage3.I've included the relevant part 
of the log below. Any ideas as to what went wrong?
Thanks,
alex

writing spherical brain to 
/data/flanders/work/alex/freesurfer/subjects/1000192/surf/lh.qsphere
spherical transformation took 0.91 hours
 navgs=32 and tol=1.000e-01
integrating with navgs=32 and tol=1.000e-01
integrating with navgs=8 and tol=1.000e-01
taking momentum steps...
integrating with navgs=8 and tol=1.000e-01
integrating with navgs=8 and tol=1.000e-01
integrating with navgs=2 and tol=1.000e-01
taking momentum steps...
integrating with navgs=2 and tol=1.000e-01
integrating with navgs=2 and tol=1.000e-01
integrating with navgs=0 and tol=1.000e-01
pass 1 complete, delta sse/iter = 0.16/60 = 0.00
final distance error %31.34
optimization complete.
unfolding took 0.81 hours
---------------------------------------------
Fix Topology lh Sat Jun 11 04:24:54 EST 2005
/data/flanders/work/alex/freesurfer/subjects/1000192/scripts
mris_fix_topology 1000192 lh
reading input surface 
/data/flanders/work/alex/freesurfer/subjects/1000192/surf/lh.qsphere...
before topology correction, eno=-301 (nv=188932, nf=378516, ne=567749, g=151)
mrisReadTriangleFile(/data/flanders/work/alex/freesurfer/subjects/1000192/surf/lh.orig):
 surface doesn't match 
/data/flanders/work/alex/freesurfer/subjects/1000192/surf/lh.qsphere

No such file or directory
mrisReadTriangleFile failed.

No such file or directory
MRISreadOriginalProperties: could not read surface file orig
No such file or directory
mris_fix_topology: could not read original surface orig
No such file or directory
reading T1 volume from T1...
reading wm segmentation from wm...

recon-all exited with errors at Sat Jun 11 04:24:58 EST 2005

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