Dear experts, Thank you for answering basic question.
Iam using Linux version of Freesurfer on Pen4 PC, and trying to run "Process Volume" with my anatomical data which was acquired by Siemens Allegra 3T maschine and converted to analyze format. "conversion" and "normalize intensities" were OK and COR001-COR256 were written in "orig" and "T1" directory. but next process failed and following message appeared. No COR-XXX file is written in "brain" directory. New mri-watershed" file is in bin/Linux directory as indicated by mailing list. Thanks in advance Tetsuya Iidaka Nagoya University Department of Psychology [EMAIL PROTECTED] ------------------------------------------------------------- /home/XXX/freesurfer//bin/Linux/mri_watershed /home/XXX/freesurfer/subjects/test01/mri/T1 /home/XXX/freesurfer/subjects/test01/mri/brain ************************************************************ The input file is /home/XXX/freesurfer/subjects/test01/mri/T1 The output file is /home/XXX/freesurfer/subjects/test01/mri/brain If this is incorrect, please exit quickly the program (Ctl-C) *************************WATERSHED************************** preflooding height equal to 25 percent Sorting... T1-weighted MRI image modification of the preflooding height to 15 percent Find the largest 110-component... Command Finished ----------------------------------------------------------------- _______________________________________________ Freesurfer mailing list [EMAIL PROTECTED] https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer