either set the pons cutting plane manually using the -pons <x> <y> <z> in mri_fill. This may fix things, but in some cases it may not due to spurious connections between the cerebellum and occipital cortex (particularly in noisy scans). These have to be corrected manually.

Bruce


On Mon, 8 Nov 2004, Calabrese Massimiliano wrote:

I'm sorry but I have another question for you.

Sometimes the cutting planes are not correct and it doesn't delete the
cerebellum.

Whay can I do? Manual editing is my only chance?

Thanks a lot

Massimiliano Calabrese
Neuroimaging Group
Neuroimmunology Branch
NINDS, NIH

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