Actually, I changed this a few weeks ago. It now creates a temp dir in the output directory, so it should be in the next release.
doug Vicka Corey wrote: > > /tmp on a mac is usually a link to /private/tmp, under which each user > will have their own directory (e.g. for me, /private/tmp/corey). > > if this is a program we want to support this way we may want to modify > the code to handle this in a more mac-compatible way. > > --vicka > > On Mon, Oct 18, 2004 at 06:17:37PM -0400, Doug Greve wrote: > > > > > > I don't know that much about Macs. I assume that they have a /tmp that > > is writable? It might be the case that that dir does not have enough > > space to hold an mri COR volume. You can change the temp dir that > > mri_motion_correcct2 uses with the "-tmpdir your/new/tmp". See if that > > solves the problem. > > > > doug > > > > > > > > > > > > Kushal Koolwal wrote: > > > > > > hi everyone, > > > > > > Well I couldn't run the mri_motion_correct on my Mac > > > machine but I found another tool called > > > mri_motion_convert2 in the /bin/noarch folder of > > > freesurfer. I was able to run the utility by > > > specifying output directory and the input files. > > > > > > But after it did all the processing it gives an error > > > like: > > > Motion Correcting /tmp/cor-2.mnc > > > Mon Oct 18 15:03:59 PDT 2004 > > > Error: opening MINC file "/tmp/cor-2.mnc". > > > Error in minctracc in file minctracc.c, line 381 > > > Cannot input volume '/tmp/cor-2.mnc'ERROR: mritoself > > > failed > > > [d99-94:bert/mri/orig] scottfre% > > > > > > I am attaching the error log file if any one wants to > > > have a detail look. > > > > > > Sincerely, > > > > > > Kushal Koolwal > > > > > > > > > _______________________________ > > > Do you Yahoo!? > > > Declare Yourself - Register online to vote today! > > > http://vote.yahoo.com > > > > > > ------------------------------------------------------------------------ > > > Name: mri_motion_correct2.log > > > mri_motion_correct2.log Type: unspecified type > > > (application/octet-stream) > > > Encoding: base64 > > > Description: mri_motion_correct2.log > > > > > > ------------------------------------------------------------------------ > > > _______________________________________________ > > > Freesurfer mailing list > > > [EMAIL PROTECTED] > > > https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer > > > > -- > > Douglas N. Greve, Ph.D. > > MGH-NMR Center > > [EMAIL PROTECTED] > > Phone Number: 617-724-2358 > > Fax: 617-726-7422 > > _______________________________________________ > > Freesurfer mailing list > > [EMAIL PROTECTED] > > https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer -- Douglas N. Greve, Ph.D. MGH-NMR Center [EMAIL PROTECTED] Phone Number: 617-724-2358 Fax: 617-726-7422 _______________________________________________ Freesurfer mailing list [EMAIL PROTECTED] https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
