Hi Patrice, I think you need to setenv the LANG variable. Check the MNI web site, this is a known bug of theirs.
Bruce On Mon, 21 Jun 2004, Patrice Seyed wrote: > Hi, > > I am experiencing the following error when running recon-all relating the > mritotal: > > mritotal -verbose -debug -clobber -protocol icbm orig/orig.mnc > transforms/talair ach.xfm Out of memory! > ERROR: mritotal failed > > I found this brought up as an issue on the freesurfer mailing list but not a > posted solution. I have been advised this is related to RH 9.0 and also that > it is fixed in the recent snapshot... > > Here are my current specs: > > Feb. 18th, 2004 Snapshot/full install of freesurfer from > (http://surfer.nmr.mgh.harvard.edu/download.html) > Is there a snapshot/patch more recent than this for freesurfer? > > Caosity (http://www.caosity.org/),which is based off the current Red Hat EL > 3.0. > > Re: the LANG variable in my current tcsh environment is: > $ echo $LANG > en_US.UTF-8 > > I edited the beginning of recon-all to reflect these variables as was > suggested: > set LANG = en_US.UTF-8 > set LANGVAR = en_US.UTF-8 > > My next run seems to have crashed the system right around where swap space > has run out (interesting): > > Mem: 513464 506716 6748 0 2040 7316 > -/+ buffers/cache: 497360 16104 > Swap: 1044176 1044044 132 > total used free shared buffers cached > Mem: 513464 505952 7512 0 2024 7180 > -/+ buffers/cache: 496748 16716 > Swap: 1044176 1044176 0 > > Thanks for any suggestions. > > Regards, > > Patrice Seyed > Linux System Administrator - SIG > RHCE, SCSA > Boston University School of Medicine > > > > _______________________________________________ > Freesurfer mailing list > [EMAIL PROTECTED] > https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer > _______________________________________________ Freesurfer mailing list [EMAIL PROTECTED] https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
