try the -u option for the following:
-slope <float s> set the curvature slope (both n and p)
-pslope <float p> set the curvature pslope (default=1.0)
-nslope <float n> set the curvature nslope (default=1.0)
-debug_voxel <int x y z> set voxel for debugging
-auto automatically detect class statistics (default)
-noauto don't automatically detect class statistics
-log log to ./segment.dat
-keep keep wm edits. maintains all values of 0 and 255
-ghi, -gray_hi <int h> set the gray matter high limit
(default=100.000)
-wlo, -wm_low <int l> set the white matter low limit
(default=90.000)
-whi, -wm_hi <int h> set the white matter high limit
(default=125.000)
-nseg <int n> thicken the n largest thin strands (default=20)
-thicken toggle thickening step (default=ON)
-fillbg toggle filling of the basal ganglia
(default=OFF)
-fillv toggle filling of the ventricles (default=OFF)
-b <float s> set blur sigma (default=0.25)
-n <int i> set # iterations of border classification
(default=1)
-t <int t> set limit to thin strands in mm (default=4)
-v verbose
-p <float p> set % threshold (default=0.80)
-x <filename> extract options from filename
-w <int w> set wsize (default=11)
-u usage
good luck,
--
brian t. quinn
On Thu, 25 Mar 2004, Tamara Knutsen wrote:
> this is all i find:
>
> [whatever:ben1] (nmr-std-env) mri_segment
> usage: mri_segment <input volume> <output volume>
>
> thanks!
>
>
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