gamal akabani hneide wrote: > > Also, what are the commonalities between fsl and freesurfer?
We've set it up so that an fsl registration matrix can be easily converted into something that freesurfer can understand (ie, a register.dat file); this is done with tkregister2. You can also resample the FSL pe and cope volumes onto the spherical surface, saving the output as .img files so that they can be used in an FSL higher-level analysis (this is done with mri_vol2surf). The result of the higher-level analysis can then be resampled onto an individual's surface with mri_surf2surf; this will also change the format to .w so that it can be rendered on the surface in tksurfer. The programs mentioned can be run with --help to get copious amounts of documentation. doug -- Douglas N. Greve, Ph.D. MGH-NMR Center [EMAIL PROTECTED] Phone Number: 617-724-2358 Fax: 617-726-7422
