Andreas Leha <andreas.l...@med.uni-goettingen.de> writes:
> Hi all,
>
> I do not know what could be the cause of this, but I can't have a
> table with header as argument to a source block any more:
>
> #+name: table_w_header
> | one | two |
> |-----+-----|
> | 1 | 3 |
>
> #+begin_src R :var tbl=table_w_header
>
> #+end_src
>
> If I do C-c C-v v on the above source block, I get this backtrace:
>
> ,----
> | Debugger entered--Lisp error: (wrong-type-argument sequencep hline)
> | length(hline)
> | mapcar(length (("one" "two") hline (1 3)))
> | org-babel-R-assign-elisp(tbl (("one" "two") hline (1 3)) nil nil)
> | #[(pair) "\302@A\303\304 \"A\305\232\303\306 \"A\305\232$\207"
> | [pair params org-babel-R-assign-elisp assoc :colnames "yes"
> | :rownames] 7]((tbl ("one" "two") hline (1 3)))
> | mapcar(#[(pair) "\302@A\303\304 \"A\305\232\303\306
> | \"A\305\232$\207" [pair params org-babel-R-assign-elisp assoc
> | :colnames "yes" :rownames] 7] ((tbl ("one" "two") hline (1 3))))
> | org-babel-variable-assignments:R(((:cache . "no") (:colname-names
> | (tbl "one" "two")) (:comments . "") (:exports . "code") (:hlines
> | . "no") (:noweb . "no") (:padline . "") (:padnewline . "yes")
> | (:result-params "replace") (:result-type . value) (:results
> | . "replace") (:rowname-names) (:session . "none") (:shebang . "")
> | (:tangle . "no") (:var tbl (1 3))))
> | org-babel-expand-body:R("\n" ((:cache . "no") (:colname-names (tbl
> | "one" "two")) (:comments . "") (:exports . "code") (:hlines . "no")
> | (:noweb . "no") (:padline . "") (:padnewline . "yes")
> | (:result-params "replace") (:result-type . value) (:results
> | . "replace") (:rowname-names) (:session . "none") (:shebang . "")
> | (:tangle . "no") (:var tbl (1 3))))
> | org-babel-expand-src-block()
> | call-interactively(org-babel-expand-src-block nil nil)
> `----
>
> I tested on with emacs -Q on
> 1. GNU Emacs 24.1.50.1 (x86_64-pc-linux-gnu, GTK+ Version 3.4.1) of
> 2012-05-02 on zelenka, modified by Debian
> 2. GNU Emacs 23.4.1 (x86_64-pc-linux-gnu, GTK+ Version 2.24.10) of 2012-04-07
> on trouble, modified by Debian
>
> My org-version: Org-mode version 7.8.09 with last commit
> ,----
> | commit 56520a6936351d6fcc149652e1ff30f50c43eb4e
> | Merge: 505cc7a 0ebeb77
> | Author: Nicolas Goaziou <n.goaz...@gmail.com>
> | Date: Wed May 9 23:34:05 2012 +0200
> |
> | Merge branch 'maint'
> `----
> So, the fix discussed in
> [[https://lists.gnu.org/archive/html/emacs-orgmode/2011-02/msg01444.html]]
> should be there.
>
>
> Not sure if this could be connected: I updated my emacs-snapshot (the
> 24 version) from [[http://emacs.naquadah.org]] today.
>
>
> Any help is highly appreciated,
> Andreas
Hi all,
sorry for answering to my own message.
I thought, that I did not pull between working state and broken state, but
apparently I did.
So, in the end, =git bisect= now told me the responsible commit:
,----
| fb7ebd2dae66a7b42aecff695fe40461a33a76ed is the first bad commit
| commit fb7ebd2dae66a7b42aecff695fe40461a33a76ed
| Author: Eric Schulte <eric.schu...@gmx.com>
| Date: Wed Apr 25 15:34:15 2012 -0400
|
| clean up the code implementing reads of irregular data into R
|
| * lisp/ob-R.el (org-babel-R-assign-elisp): Clean up the code
| implementing reads of irregular data into R.
`----
This commit is revertable, and reverting this commit also solves the
described issue for me.
Cheers,
Andreas
