Sorry for the confusion re: threads.

> Hi Sean
> The debug lines in reference to...?
-- In case you had inserted extra lines in the code to log information for 
debugging.

> If you're thinking about my LabValueFinder conversation with Kean the other
> day, I've been working with him on another email thread and we've found
> some answers.   Is that what you were interested in?
-- Yes, sorry for any confusion.

Sean


>Peter
________________________________________
From: Kean Kaufmann <k...@recordsone.com>
Sent: Sunday, December 27, 2020 10:23 AM
To: dev@ctakes.apache.org
Cc: pabramowit...@gmail.com
Subject: Re: Lab Value Finder [EXTERNAL]

* External Email - Caution *


> I've attached the Junit test based off your unit test and its debug
output.  You'll have to change the package name, though.

Hi Peter -- Yes, that does sound weird. Not seeing an attachment. Send it
along and I'll give troubleshooting a shot.

Happy holidays, everybody.

On Thu, Dec 24, 2020 at 7:21 AM Peter Abramowitsch <pabramowit...@gmail.com>
wrote:

> Hi Kean
> I hope this doesn't make you regret having mentioned that you wrote the
> LabValueFinder in an email a few weeks back... (:-)
>
> I've been trying to figure out why it isn't working for me in a production
> setting.
>
> So I'm now just running it with its own unit tests (which I turned into a
> simple Junit test) against the usual sno_rx_16ab dictionary.  They all
> fail.   I added one extremely simple test to your more complex ones, but
> that fails too - which makes me think there's something fundamental that
> may be easy to fix
>
> It finds the concepts and many of the candidate "values"  but matches the
> wrong value or no value with a concept.  The debug output shows odd things
> like this:   Two entries for one concept but with different search windows,
> one of them with window begin and end swapped.
>
>
> *24 Dec 2020 12:56:38 DEBUG LabValueFinder - Seeking value for:
> LabMention(14-21): Lactate between 21 and 1424 Dec 2020 12:56:38 DEBUG
> LabValueFinder - Seeking value for: LabMention(14-21): Lactate between 21
> and 29*
>
> I've been going through the code, but it would probably be easier for you
> to spot the issue rather than a person unfamiliar with it.   Do you have a
> moment?
>
> I've attached the Junit test based off your unit test and its debug
> output.  You'll have to change the package name, though.
>
> Peter
>

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