Hi Sean,
Thank you for your reply. I was using Java SE 12.0.1. I installed Java 8
after your response.
java -version
openjdk version "1.8.0_212"
OpenJDK Runtime Environment (AdoptOpenJDK)(build 1.8.0_212-b04)
OpenJDK 64-Bit Server VM (AdoptOpenJDK)(build 25.212-b04, mixed mode)
Now I get the following error when I build:
[*INFO*]
[*INFO*] *--- *sonar-maven-plugin:3.6.0.1398:sonar *(default-cli)* @ ctakes*
---*
[*INFO*] User cache: /Users/mamir/.sonar/cache
[*INFO*] SonarQube version: 5.6.3
[*INFO*] Default locale: "en_US", source code encoding: "UTF-8"
[*INFO*] Load global repositories
[*INFO*]
*------------------------------------------------------------------------*
[*INFO*] *Reactor Summary for Apache cTAKES 4.0.1-SNAPSHOT:*
[*INFO*]
[*INFO*] Apache cTAKES ...................................... *FAILURE* [
17.109 s]
[*INFO*] ctakes-gui-res .....................................
*SUCCESS* [ 0.729
s]
[*INFO*] Apache cTAKES Resources coreference ................
*SUCCESS* [ 3.359
s]
[*INFO*] Apache cTAKES Resources temporal ...................
*SUCCESS* [ 0.602
s]
[*INFO*] Apache cTAKES Resources relation-extractor .........
*SUCCESS* [ 0.269
s]
[*INFO*] Apache cTAKES Resources dictionary-lookup-fast-res .
*SUCCESS* [ 1.048
s]
[*INFO*] Apache cTAKES Resources core .......................
*SUCCESS* [ 0.355
s]
[*INFO*] Apache cTAKES common type system ...................
*SUCCESS* [ 3.008
s]
[*INFO*] Apache cTAKES utils ................................
*SUCCESS* [ 0.753
s]
[*INFO*] Apache cTAKES core .................................
*SUCCESS* [ 6.828
s]
[*INFO*] Apache cTAKES dictionary lookup fast ...............
*SUCCESS* [ 0.700
s]
[*INFO*] Apache cTAKES document preprocessor ................
*SUCCESS* [ 0.850
s]
[*INFO*] Apache cTAKES Resources lvg ........................ *SUCCESS* [
11.420 s]
[*INFO*] Apache cTAKES LVG lexical tools ....................
*SUCCESS* [ 0.639
s]
[*INFO*] Apache cTAKES Resources ne-contexts ................
*SUCCESS* [ 0.210
s]
[*INFO*] Apache cTAKES named entity contexts ................
*SUCCESS* [ 1.214
s]
[*INFO*] Apache cTAKES Resources assertion ..................
*SUCCESS* [ 1.279
s]
[*INFO*] Apache cTAKES Resources constituency-parser ........
*SUCCESS* [ 1.765
s]
[*INFO*] Apache cTAKES Constituency Parser ..................
*SUCCESS* [ 0.503
s]
[*INFO*] Apache cTAKES Resources dependency-parser .......... *SUCCESS* [
13.205 s]
[*INFO*] Apache cTAKES Resources pos-tagger .................
*SUCCESS* [ 0.920
s]
[*INFO*] Apache cTAKES part-of-speech tagger ................
*SUCCESS* [ 1.693
s]
[*INFO*] Apache cTAKES Dependency Parser .................... *SUCCESS* [
20.948 s]
[*INFO*] Apache cTAKES context dependent tokenizer ..........
*SUCCESS* [ 1.389
s]
[*INFO*] Apache cTAKES Resources ctakes-chunker-res .........
*SUCCESS* [ 0.773
s]
[*INFO*] Apache cTAKES chunker ..............................
*SUCCESS* [ 0.520
s]
[*INFO*] Apache cTAKES Assertion ............................
*SUCCESS* [ 1.412
s]
[*INFO*] ctakes-clinical-pipeline-res .......................
*SUCCESS* [ 0.200
s]
[*INFO*] Apache cTAKES ctakes-clinical-pipeline .............
*SUCCESS* [ 0.740
s]
[*INFO*] Apache cTAKES Relation Extractor ...................
*SUCCESS* [ 2.244
s]
[*INFO*] Apache cTAKES Temporal Information Extraction ...... *SUCCESS* [
56.385 s]
[*INFO*] Apache cTAKES CoReference Resolver .................
*SUCCESS* [ 1.674
s]
[*INFO*] ctakes-gui .........................................
*SUCCESS* [ 1.158
s]
[*INFO*] Apache cTAKES fhir support .........................
*SUCCESS* [ 0.690
s]
[*INFO*] Apache cTAKES Resources dictionary-lookup ..........
*SUCCESS* [ 6.639
s]
[*INFO*] Apache cTAKES dictionary lookup ....................
*SUCCESS* [ 0.641
s]
[*INFO*] Apache cTAKES Resources drug-ner ...................
*SUCCESS* [ 0.244
s]
[*INFO*] Apache cTAKES Drug NER .............................
*SUCCESS* [ 0.837
s]
[*INFO*] Apache cTAKES Resources side-effect ................
*SUCCESS* [ 0.287
s]
[*INFO*] Apache cTAKES Side Effects .........................
*SUCCESS* [ 0.560
s]
[*INFO*] Apache cTAKES Resources smoking-status .............
*SUCCESS* [ 0.279
s]
[*INFO*] Apache cTAKES Smoking Status .......................
*SUCCESS* [ 0.655
s]
[*INFO*] Apache cTAKES Resources assertion-zoner ............
*SUCCESS* [ 0.290
s]
[*INFO*] Apache cTAKES Assertion's zoner ....................
*SUCCESS* [ 0.411
s]
[*INFO*] ctakes-examples-res ................................
*SUCCESS* [ 0.306
s]
[*INFO*] ctakes-examples ....................................
*SUCCESS* [ 0.809
s]
[*INFO*] Apache cTAKES Resources ctakes-ytex-res ............
*SUCCESS* [ 0.271
s]
[*INFO*] Apache cTAKES YTEX ................................. *FAILURE* [
36.312 s]
[*INFO*] Apache cTAKES YTEX UIMA ............................ *SKIPPED*
[*INFO*] Apache cTAKES YTEX Web ............................. *SKIPPED*
[*INFO*] Apache cTAKES Distribution ......................... *SKIPPED*
[*INFO*] Apache cTAKES Regression-test ...................... *SUCCESS* [
24.494 s]
[*INFO*] Apache cTAKES template filler ......................
*SUCCESS* [ 0.638
s]
[*INFO*]
*------------------------------------------------------------------------*
[*INFO*] *BUILD FAILURE*
[*INFO*]
*------------------------------------------------------------------------*
[*INFO*] Total time: 03:52 min
[*INFO*] Finished at: 2019-07-18T09:16:11-07:00
[*INFO*]
*------------------------------------------------------------------------*
[*ERROR*] Failed to execute goal
org.apache.maven.plugins:maven-failsafe-plugin:2.20.1:verify *(default)* on
project ctakes-ytex: *There are test failures.*
[*ERROR*]
[*ERROR*] *Please refer to
/Users/mamir/project_ctake/ctake/trunk/ctakes-ytex/target/failsafe-reports
for the individual test results.*
[*ERROR*] *Please refer to dump files (if any exist) [date]-jvmRun[N].dump,
[date].dumpstream and [date]-jvmRun[N].dumpstream.*
[*ERROR*] -> *[Help 1]*
*org.apache.maven.lifecycle.LifecycleExecutionException*: *Failed to
execute goal **org.apache.maven.plugins:maven-failsafe-plugin:2.20.1:verify*
*(default)* on project ctakes-ytex: *There are test failures.*
*Please refer to
/Users/mamir/project_ctake/ctake/trunk/ctakes-ytex/target/failsafe-reports
for the individual test results.*
*Please refer to dump files (if any exist) [date]-jvmRun[N].dump,
[date].dumpstream and [date]-jvmRun[N].dumpstream.*
*at* org.apache.maven.lifecycle.internal.MojoExecutor.execute (
*MojoExecutor.java:215*)
*at* org.apache.maven.lifecycle.internal.MojoExecutor.execute (
*MojoExecutor.java:156*)
*at* org.apache.maven.lifecycle.internal.MojoExecutor.execute (
*MojoExecutor.java:148*)
*at*
org.apache.maven.lifecycle.internal.LifecycleModuleBuilder.buildProject (
*LifecycleModuleBuilder.java:117*)
*at*
org.apache.maven.lifecycle.internal.LifecycleModuleBuilder.buildProject (
*LifecycleModuleBuilder.java:81*)
*at*
org.apache.maven.lifecycle.internal.builder.singlethreaded.SingleThreadedBuilder.build
(*SingleThreadedBuilder.java:56*)
*at* org.apache.maven.lifecycle.internal.LifecycleStarter.execute (
*LifecycleStarter.java:128*)
*at* org.apache.maven.DefaultMaven.doExecute (*DefaultMaven.java:305*)
*at* org.apache.maven.DefaultMaven.doExecute (*DefaultMaven.java:192*)
*at* org.apache.maven.DefaultMaven.execute (*DefaultMaven.java:105*)
*at* org.apache.maven.cli.MavenCli.execute (*MavenCli.java:956*)
*at* org.apache.maven.cli.MavenCli.doMain (*MavenCli.java:288*)
*at* org.apache.maven.cli.MavenCli.main (*MavenCli.java:192*)
*at* sun.reflect.NativeMethodAccessorImpl.invoke0 (*Native Method*)
*at* sun.reflect.NativeMethodAccessorImpl.invoke (
*NativeMethodAccessorImpl.java:62*)
*at* sun.reflect.DelegatingMethodAccessorImpl.invoke (
*DelegatingMethodAccessorImpl.java:43*)
*at* java.lang.reflect.Method.invoke (*Method.java:498*)
*at* org.codehaus.plexus.classworlds.launcher.Launcher.launchEnhanced (
*Launcher.java:282*)
*at* org.codehaus.plexus.classworlds.launcher.Launcher.launch (
*Launcher.java:225*)
*at* org.codehaus.plexus.classworlds.launcher.Launcher.mainWithExitCode
(*Launcher.java:406*)
*at* org.codehaus.plexus.classworlds.launcher.Launcher.main (
*Launcher.java:347*)
*Caused by*: org.apache.maven.plugin.MojoFailureException: *There are test
failures.*
*Please refer to
/Users/mamir/project_ctake/ctake/trunk/ctakes-ytex/target/failsafe-reports
for the individual test results.*
*Please refer to dump files (if any exist) [date]-jvmRun[N].dump,
[date].dumpstream and [date]-jvmRun[N].dumpstream.*
*at* org.apache.maven.plugin.surefire.SurefireHelper.throwException (
*SurefireHelper.java:240*)
*at* org.apache.maven.plugin.surefire.SurefireHelper.reportExecution (
*SurefireHelper.java:112*)
*at* org.apache.maven.plugin.failsafe.VerifyMojo.execute (
*VerifyMojo.java:188*)
*at* org.apache.maven.plugin.DefaultBuildPluginManager.executeMojo (
*DefaultBuildPluginManager.java:137*)
*at* org.apache.maven.lifecycle.internal.MojoExecutor.execute (
*MojoExecutor.java:210*)
*at* org.apache.maven.lifecycle.internal.MojoExecutor.execute (
*MojoExecutor.java:156*)
*at* org.apache.maven.lifecycle.internal.MojoExecutor.execute (
*MojoExecutor.java:148*)
*at*
org.apache.maven.lifecycle.internal.LifecycleModuleBuilder.buildProject (
*LifecycleModuleBuilder.java:117*)
*at*
org.apache.maven.lifecycle.internal.LifecycleModuleBuilder.buildProject (
*LifecycleModuleBuilder.java:81*)
*at*
org.apache.maven.lifecycle.internal.builder.singlethreaded.SingleThreadedBuilder.build
(*SingleThreadedBuilder.java:56*)
*at* org.apache.maven.lifecycle.internal.LifecycleStarter.execute (
*LifecycleStarter.java:128*)
*at* org.apache.maven.DefaultMaven.doExecute (*DefaultMaven.java:305*)
*at* org.apache.maven.DefaultMaven.doExecute (*DefaultMaven.java:192*)
*at* org.apache.maven.DefaultMaven.execute (*DefaultMaven.java:105*)
*at* org.apache.maven.cli.MavenCli.execute (*MavenCli.java:956*)
*at* org.apache.maven.cli.MavenCli.doMain (*MavenCli.java:288*)
*at* org.apache.maven.cli.MavenCli.main (*MavenCli.java:192*)
*at* sun.reflect.NativeMethodAccessorImpl.invoke0 (*Native Method*)
*at* sun.reflect.NativeMethodAccessorImpl.invoke (
*NativeMethodAccessorImpl.java:62*)
*at* sun.reflect.DelegatingMethodAccessorImpl.invoke (
*DelegatingMethodAccessorImpl.java:43*)
*at* java.lang.reflect.Method.invoke (*Method.java:498*)
*at* org.codehaus.plexus.classworlds.launcher.Launcher.launchEnhanced (
*Launcher.java:282*)
*at* org.codehaus.plexus.classworlds.launcher.Launcher.launch (
*Launcher.java:225*)
*at* org.codehaus.plexus.classworlds.launcher.Launcher.mainWithExitCode
(*Launcher.java:406*)
*at* org.codehaus.plexus.classworlds.launcher.Launcher.main (
*Launcher.java:347*)
[*ERROR*] Failed to execute goal
org.sonarsource.scanner.maven:sonar-maven-plugin:3.6.0.1398:sonar
*(default-cli)* on project ctakes: *You're not authorized to execute any
SonarQube analysis. Please contact your SonarQube administrator.* -> *[Help
2]*
*org.apache.maven.lifecycle.LifecycleExecutionException*: *Failed to
execute goal *
*org.sonarsource.scanner.maven:sonar-maven-plugin:3.6.0.1398:sonar*
*(default-cli)* on project ctakes: *You're not authorized to execute any
SonarQube analysis. Please contact your SonarQube administrator.*
*at* org.apache.maven.lifecycle.internal.MojoExecutor.execute (
*MojoExecutor.java:215*)
*at* org.apache.maven.lifecycle.internal.MojoExecutor.execute (
*MojoExecutor.java:156*)
*at* org.apache.maven.lifecycle.internal.MojoExecutor.execute (
*MojoExecutor.java:148*)
*at*
org.apache.maven.lifecycle.internal.LifecycleModuleBuilder.buildProject (
*LifecycleModuleBuilder.java:117*)
*at*
org.apache.maven.lifecycle.internal.LifecycleModuleBuilder.buildProject (
*LifecycleModuleBuilder.java:81*)
*at*
org.apache.maven.lifecycle.internal.builder.singlethreaded.SingleThreadedBuilder.build
(*SingleThreadedBuilder.java:56*)
*at* org.apache.maven.lifecycle.internal.LifecycleStarter.execute (
*LifecycleStarter.java:128*)
*at* org.apache.maven.DefaultMaven.doExecute (*DefaultMaven.java:305*)
*at* org.apache.maven.DefaultMaven.doExecute (*DefaultMaven.java:192*)
*at* org.apache.maven.DefaultMaven.execute (*DefaultMaven.java:105*)
*at* org.apache.maven.cli.MavenCli.execute (*MavenCli.java:956*)
*at* org.apache.maven.cli.MavenCli.doMain (*MavenCli.java:288*)
*at* org.apache.maven.cli.MavenCli.main (*MavenCli.java:192*)
*at* sun.reflect.NativeMethodAccessorImpl.invoke0 (*Native Method*)
*at* sun.reflect.NativeMethodAccessorImpl.invoke (
*NativeMethodAccessorImpl.java:62*)
*at* sun.reflect.DelegatingMethodAccessorImpl.invoke (
*DelegatingMethodAccessorImpl.java:43*)
*at* java.lang.reflect.Method.invoke (*Method.java:498*)
*at* org.codehaus.plexus.classworlds.launcher.Launcher.launchEnhanced (
*Launcher.java:282*)
*at* org.codehaus.plexus.classworlds.launcher.Launcher.launch (
*Launcher.java:225*)
*at* org.codehaus.plexus.classworlds.launcher.Launcher.mainWithExitCode
(*Launcher.java:406*)
*at* org.codehaus.plexus.classworlds.launcher.Launcher.main (
*Launcher.java:347*)
*Caused by*: org.apache.maven.plugin.MojoExecutionException: *You're not
authorized to execute any SonarQube analysis. Please contact your SonarQube
administrator.*
*at*
org.sonarsource.scanner.maven.bootstrap.ScannerBootstrapper.execute (
*ScannerBootstrapper.java:67*)
*at* org.sonarsource.scanner.maven.SonarQubeMojo.execute (
*SonarQubeMojo.java:104*)
*at* org.apache.maven.plugin.DefaultBuildPluginManager.executeMojo (
*DefaultBuildPluginManager.java:137*)
*at* org.apache.maven.lifecycle.internal.MojoExecutor.execute (
*MojoExecutor.java:210*)
*at* org.apache.maven.lifecycle.internal.MojoExecutor.execute (
*MojoExecutor.java:156*)
*at* org.apache.maven.lifecycle.internal.MojoExecutor.execute (
*MojoExecutor.java:148*)
*at*
org.apache.maven.lifecycle.internal.LifecycleModuleBuilder.buildProject (
*LifecycleModuleBuilder.java:117*)
*at*
org.apache.maven.lifecycle.internal.LifecycleModuleBuilder.buildProject (
*LifecycleModuleBuilder.java:81*)
*at*
org.apache.maven.lifecycle.internal.builder.singlethreaded.SingleThreadedBuilder.build
(*SingleThreadedBuilder.java:56*)
*at* org.apache.maven.lifecycle.internal.LifecycleStarter.execute (
*LifecycleStarter.java:128*)
*at* org.apache.maven.DefaultMaven.doExecute (*DefaultMaven.java:305*)
*at* org.apache.maven.DefaultMaven.doExecute (*DefaultMaven.java:192*)
*at* org.apache.maven.DefaultMaven.execute (*DefaultMaven.java:105*)
*at* org.apache.maven.cli.MavenCli.execute (*MavenCli.java:956*)
*at* org.apache.maven.cli.MavenCli.doMain (*MavenCli.java:288*)
*at* org.apache.maven.cli.MavenCli.main (*MavenCli.java:192*)
*at* sun.reflect.NativeMethodAccessorImpl.invoke0 (*Native Method*)
*at* sun.reflect.NativeMethodAccessorImpl.invoke (
*NativeMethodAccessorImpl.java:62*)
*at* sun.reflect.DelegatingMethodAccessorImpl.invoke (
*DelegatingMethodAccessorImpl.java:43*)
*at* java.lang.reflect.Method.invoke (*Method.java:498*)
*at* org.codehaus.plexus.classworlds.launcher.Launcher.launchEnhanced (
*Launcher.java:282*)
*at* org.codehaus.plexus.classworlds.launcher.Launcher.launch (
*Launcher.java:225*)
*at* org.codehaus.plexus.classworlds.launcher.Launcher.mainWithExitCode
(*Launcher.java:406*)
*at* org.codehaus.plexus.classworlds.launcher.Launcher.main (
*Launcher.java:347*)
*Caused by*: org.sonar.api.utils.MessageException: *You're not authorized
to execute any SonarQube analysis. Please contact your SonarQube
administrator.*
[*ERROR*]
[*ERROR*] Re-run Maven using the *-X* switch to enable full debug logging.
[*ERROR*]
[*ERROR*] For more information about the errors and possible solutions,
please read the following articles:
[*ERROR*] *[Help 1]*
http://cwiki.apache.org/confluence/display/MAVEN/MojoFailureException
[*ERROR*] *[Help 2]*
http://cwiki.apache.org/confluence/display/MAVEN/MojoExecutionException
[*ERROR*]
[*ERROR*] After correcting the problems, you can resume the build with the
command
[*ERROR*] *mvn <goals> -rf :ctakes-ytex*
Thanks,
Maral
On Thu, Jul 18, 2019 at 5:23 AM Finan, Sean <
sean.fi...@childrens.harvard.edu> wrote:
> Hi Maral,
>
> What version of java are you using? Java 8 is the recommended version.
>
> Sean
> ________________________________________
> From: Maral Amir <maraljav...@gmail.com>
> Sent: Thursday, July 18, 2019 1:39 AM
> To: dev@ctakes.apache.org
> Subject: Re: Build Error in cTAKES YTEX [EXTERNAL]
>
> Hi Gandhi,
>
> Thank you for your reply. I installed the source code following the
> Developer's install guide. ( subversion + Git and then Rebase after svn
> checkin)
>
> https://urldefense.proofpoint.com/v2/url?u=https-3A__cwiki.apache.org_confluence_display_CTAKES_cTAKES-2B4.0-2BDeveloper-2BInstall-2BGuide&d=DwIBaQ&c=qS4goWBT7poplM69zy_3xhKwEW14JZMSdioCoppxeFU&r=fs67GvlGZstTpyIisCYNYmQCP6r0bcpKGd4f7d4gTao&m=OLKvVsKS9cIs1OvEOxLJN83uY13mWEPmfQaxzMeicqs&s=4ZFZ9gtgiaIRnqTY6fIS5zQTvrApEjeQC-9ekag5nB0&e=
>
> I should mention I have not worked with Java and Maven before. Is there any
> other working directory that you would recommend me to get the source code
> from. I have macOS Mojave.
>
> Thanks,
> Maral
>
> On Wed, Jul 17, 2019 at 8:25 PM gandhi rajan <gandhiraja...@gmail.com>
> wrote:
>
> > Hi Maral,
> >
> > I could see the following error in the stacktrace,
> >
> > java.lang.NoClassDefFoundError:
> > javax/activation/MimeTypeParseException
> >
> > Could be an issue related to missing jar or classpath. Between, from
> where
> > did you check out the source code from?
> >
> > On Thursday, July 18, 2019, Maral Amir <maraljav...@gmail.com> wrote:
> >
> > > Hi,
> > >
> > > I am building the cTAKES developer version using the following command.
> > >
> > > mvn --fail-at-end --errors --update-snapshots clean install sonar:sonar
> > > -DskipTests=false -Dsonar.scm.provider=svn -Dsonar.host.url=
> > >
> https://urldefense.proofpoint.com/v2/url?u=https-3A__builds.apache.org_analysis&d=DwIBaQ&c=qS4goWBT7poplM69zy_3xhKwEW14JZMSdioCoppxeFU&r=fs67GvlGZstTpyIisCYNYmQCP6r0bcpKGd4f7d4gTao&m=OLKvVsKS9cIs1OvEOxLJN83uY13mWEPmfQaxzMeicqs&s=cddyaF0GBjzB-VeKidp23cWQ3u3Py5GYA5xAYNFnoNY&e=
> > >
> > > I also tried the following command:
> > >
> > >
> > > mvn clean install
> > >
> > >
> > > For both I get the following error:
> > >
> > >
> > >
> > > [*INFO*] *-------------------< *org.apache.ctakes:ctakes-ytex*
> > > >--------------------*
> > >
> > > [*INFO*] *Building Apache cTAKES YTEX 4.0.1-SNAPSHOT
> > > [48/53]*
> > >
> > > [*INFO*] *--------------------------------[ jar
> > > ]---------------------------------*
> > >
> > > [*INFO*]
> > >
> > > [*INFO*] *--- *maven-clean-plugin:2.4.1:clean *(default-clean)* @
> > > ctakes-ytex* ---*
> > >
> > > [*INFO*] Deleting /Users/mamir/projects/ctakes/trunk/ctakes-ytex/target
> > >
> > > [*INFO*]
> > >
> > > [*INFO*] *--- *jaxb2-maven-plugin:1.6:xjc *(default)* @ ctakes-ytex*
> ---*
> > >
> > > [*INFO*] Generating source...
> > >
> > > [*INFO*] parsing a schema...
> > >
> > > [*INFO*]
> > >
> >
> *------------------------------------------------------------------------*
> > >
> > > [*INFO*] *Reactor Summary for Apache cTAKES 4.0.1-SNAPSHOT:*
> > >
> > > [*INFO*]
> > >
> > > [*INFO*] Apache cTAKES ......................................
> > > *SUCCESS* [ 0.870
> > > s]
> > >
> > > [*INFO*] ctakes-gui-res .....................................
> > > *SUCCESS* [ 0.862
> > > s]
> > >
> > > [*INFO*] Apache cTAKES Resources coreference ................
> > > *SUCCESS* [ 3.261
> > > s]
> > >
> > > [*INFO*] Apache cTAKES Resources temporal ...................
> > > *SUCCESS* [ 0.584
> > > s]
> > >
> > > [*INFO*] Apache cTAKES Resources relation-extractor .........
> > > *SUCCESS* [ 0.267
> > > s]
> > >
> > > [*INFO*] Apache cTAKES Resources dictionary-lookup-fast-res .
> > > *SUCCESS* [ 0.945
> > > s]
> > >
> > > [*INFO*] Apache cTAKES Resources core .......................
> > > *SUCCESS* [ 0.355
> > > s]
> > >
> > > [*INFO*] Apache cTAKES common type system ...................
> > > *SUCCESS* [ 3.086
> > > s]
> > >
> > > [*INFO*] Apache cTAKES utils ................................
> > > *SUCCESS* [ 0.783
> > > s]
> > >
> > > [*INFO*] Apache cTAKES core .................................
> > > *SUCCESS* [ 5.913
> > > s]
> > >
> > > [*INFO*] Apache cTAKES dictionary lookup fast ...............
> > > *SUCCESS* [ 0.890
> > > s]
> > >
> > > [*INFO*] Apache cTAKES document preprocessor ................
> > > *SUCCESS* [ 0.911
> > > s]
> > >
> > > [*INFO*] Apache cTAKES Resources lvg ........................
> *SUCCESS* [
> > > 11.864 s]
> > >
> > > [*INFO*] Apache cTAKES LVG lexical tools ....................
> > > *SUCCESS* [ 0.719
> > > s]
> > >
> > > [*INFO*] Apache cTAKES Resources ne-contexts ................
> > > *SUCCESS* [ 0.226
> > > s]
> > >
> > > [*INFO*] Apache cTAKES named entity contexts ................
> > > *SUCCESS* [ 1.503
> > > s]
> > >
> > > [*INFO*] Apache cTAKES Resources assertion ..................
> > > *SUCCESS* [ 1.482
> > > s]
> > >
> > > [*INFO*] Apache cTAKES Resources constituency-parser ........
> > > *SUCCESS* [ 1.999
> > > s]
> > >
> > > [*INFO*] Apache cTAKES Constituency Parser ..................
> > > *SUCCESS* [ 0.769
> > > s]
> > >
> > > [*INFO*] Apache cTAKES Resources dependency-parser ..........
> *SUCCESS* [
> > > 14.499 s]
> > >
> > > [*INFO*] Apache cTAKES Resources pos-tagger .................
> > > *SUCCESS* [ 0.878
> > > s]
> > >
> > > [*INFO*] Apache cTAKES part-of-speech tagger ................
> > > *SUCCESS* [ 1.723
> > > s]
> > >
> > > [*INFO*] Apache cTAKES Dependency Parser ....................
> *SUCCESS* [
> > > 17.419 s]
> > >
> > > [*INFO*] Apache cTAKES context dependent tokenizer ..........
> > > *SUCCESS* [ 1.547
> > > s]
> > >
> > > [*INFO*] Apache cTAKES Resources ctakes-chunker-res .........
> > > *SUCCESS* [ 0.822
> > > s]
> > >
> > > [*INFO*] Apache cTAKES chunker ..............................
> > > *SUCCESS* [ 0.835
> > > s]
> > >
> > > [*INFO*] Apache cTAKES Assertion ............................
> > > *SUCCESS* [ 1.726
> > > s]
> > >
> > > [*INFO*] ctakes-clinical-pipeline-res .......................
> > > *SUCCESS* [ 0.200
> > > s]
> > >
> > > [*INFO*] Apache cTAKES ctakes-clinical-pipeline .............
> > > *SUCCESS* [ 1.046
> > > s]
> > >
> > > [*INFO*] Apache cTAKES Relation Extractor ...................
> > > *SUCCESS* [ 3.062
> > > s]
> > >
> > > [*INFO*] Apache cTAKES Temporal Information Extraction ......
> *SUCCESS* [
> > > 52.554 s]
> > >
> > > [*INFO*] Apache cTAKES CoReference Resolver .................
> > > *SUCCESS* [ 2.403
> > > s]
> > >
> > > [*INFO*] ctakes-gui .........................................
> > > *SUCCESS* [ 1.531
> > > s]
> > >
> > > [*INFO*] Apache cTAKES fhir support .........................
> > > *SUCCESS* [ 0.759
> > > s]
> > >
> > > [*INFO*] Apache cTAKES Resources dictionary-lookup ..........
> > > *SUCCESS* [ 7.312
> > > s]
> > >
> > > [*INFO*] Apache cTAKES dictionary lookup ....................
> > > *SUCCESS* [ 0.711
> > > s]
> > >
> > > [*INFO*] Apache cTAKES Resources drug-ner ...................
> > > *SUCCESS* [ 0.272
> > > s]
> > >
> > > [*INFO*] Apache cTAKES Drug NER .............................
> > > *SUCCESS* [ 1.158
> > > s]
> > >
> > > [*INFO*] Apache cTAKES Resources side-effect ................
> > > *SUCCESS* [ 0.268
> > > s]
> > >
> > > [*INFO*] Apache cTAKES Side Effects .........................
> > > *SUCCESS* [ 0.837
> > > s]
> > >
> > > [*INFO*] Apache cTAKES Resources smoking-status .............
> > > *SUCCESS* [ 0.347
> > > s]
> > >
> > > [*INFO*] Apache cTAKES Smoking Status .......................
> > > *SUCCESS* [ 1.081
> > > s]
> > >
> > > [*INFO*] Apache cTAKES Resources assertion-zoner ............
> > > *SUCCESS* [ 0.296
> > > s]
> > >
> > > [*INFO*] Apache cTAKES Assertion's zoner ....................
> > > *SUCCESS* [ 0.686
> > > s]
> > >
> > > [*INFO*] ctakes-examples-res ................................
> > > *SUCCESS* [ 0.443
> > > s]
> > >
> > > [*INFO*] ctakes-examples ....................................
> > > *SUCCESS* [ 1.060
> > > s]
> > >
> > > [*INFO*] Apache cTAKES Resources ctakes-ytex-res ............
> > > *SUCCESS* [ 0.321
> > > s]
> > >
> > > [*INFO*] Apache cTAKES YTEX .................................
> > > *FAILURE* [ 0.666
> > > s]
> > >
> > > [*INFO*] Apache cTAKES YTEX UIMA ............................ *SKIPPED*
> > >
> > > [*INFO*] Apache cTAKES YTEX Web ............................. *SKIPPED*
> > >
> > > [*INFO*] Apache cTAKES Distribution ......................... *SKIPPED*
> > >
> > > [*INFO*] Apache cTAKES Regression-test ...................... *SKIPPED*
> > >
> > > [*INFO*] Apache cTAKES template filler ...................... *SKIPPED*
> > >
> > > [*INFO*]
> > >
> >
> *------------------------------------------------------------------------*
> > >
> > > [*INFO*] *BUILD FAILURE*
> > >
> > > [*INFO*]
> > >
> >
> *------------------------------------------------------------------------*
> > >
> > > [*INFO*] Total time: 02:34 min
> > >
> > > [*INFO*] Finished at: 2019-07-17T17:53:36-07:00
> > >
> > > [*INFO*]
> > >
> >
> *------------------------------------------------------------------------*
> > >
> > > ---------------------------------------------------
> > >
> > > constituent[0]: file:/Users/mamir/apache-maven-3.6.1/conf/logging/
> > >
> > > constituent[1]:
> > >
> file:/Users/mamir/apache-maven-3.6.1/lib/maven-settings-builder-3.6.1.jar
> > >
> > > constituent[2]:
> > > file:/Users/mamir/apache-maven-3.6.1/lib/maven-
> > > resolver-transport-wagon-1.3.3.jar
> > >
> > > constituent[3]:
> > > file:/Users/mamir/apache-maven-3.6.1/lib/maven-compat-3.6.1.jar
> > >
> > > constituent[4]: file:/Users/mamir/apache-maven-3.6.1/lib/aopalliance-1.
> > > 0.jar
> > >
> > > constituent[5]:
> > > file:/Users/mamir/apache-maven-3.6.1/lib/maven-plugin-api-3.6.1.jar
> > >
> > > constituent[6]:
> > > file:/Users/mamir/apache-maven-3.6.1/lib/plexus-cipher-1.7.jar
> > >
> > > constituent[7]:
> > > file:/Users/mamir/apache-maven-3.6.1/lib/plexus-interpolation-1.25.jar
> > >
> > > constituent[8]:
> > > file:/Users/mamir/apache-maven-3.6.1/lib/guice-4.2.1-no_aop.jar
> > >
> > > constituent[9]:
> > > file:/Users/mamir/apache-maven-3.6.1/lib/slf4j-api-1.7.25.jar
> > >
> > > constituent[10]:
> > >
> >
> file:/Users/mamir/apache-maven-3.6.1/lib/error_prone_annotations-2.1.3.jar
> > >
> > > constituent[11]:
> file:/Users/mamir/apache-maven-3.6.1/lib/cdi-api-1.0.jar
> > >
> > > constituent[12]:
> > > file:/Users/mamir/apache-maven-3.6.1/lib/maven-slf4j-provider-3.6.1.jar
> > >
> > > constituent[13]:
> > > file:/Users/mamir/apache-maven-3.6.1/lib/jcl-over-slf4j-1.7.25.jar
> > >
> > > constituent[14]:
> > >
> >
> file:/Users/mamir/apache-maven-3.6.1/lib/maven-resolver-provider-3.6.1.jar
> > >
> > > constituent[15]:
> > > file:/Users/mamir/apache-maven-3.6.1/lib/maven-artifact-3.6.1.jar
> > >
> > > constituent[16]:
> > > file:/Users/mamir/apache-maven-3.6.1/lib/maven-resolver-spi-1.3.3.jar
> > >
> > > constituent[17]:
> > > file:/Users/mamir/apache-maven-3.6.1/lib/maven-resolver-util-1.3.3.jar
> > >
> > > constituent[18]:
> > > file:/Users/mamir/apache-maven-3.6.1/lib/wagon-http-3.3.2-shaded.jar
> > >
> > > constituent[19]:
> > > file:/Users/mamir/apache-maven-3.6.1/lib/plexus-sec-dispatcher-1.4.jar
> > >
> > > constituent[20]:
> > > file:/Users/mamir/apache-maven-3.6.1/lib/plexus-
> > > component-annotations-1.7.1.jar
> > >
> > > constituent[21]:
> > > file:/Users/mamir/apache-maven-3.6.1/lib/maven-
> > > repository-metadata-3.6.1.jar
> > >
> > > constituent[22]:
> > > file:/Users/mamir/apache-maven-3.6.1/lib/plexus-utils-3.2.0.jar
> > >
> > > constituent[23]:
> > > file:/Users/mamir/apache-maven-3.6.1/lib/commons-cli-1.4.jar
> > >
> > > constituent[24]: file:/Users/mamir/apache-maven-3.6.1/lib/commons-io-2.
> > > 5.jar
> > >
> > > constituent[25]:
> > file:/Users/mamir/apache-maven-3.6.1/lib/jansi-1.17.1.jar
> > >
> > > constituent[26]:
> > > file:/Users/mamir/apache-maven-3.6.1/lib/maven-resolver-impl-1.3.3.jar
> > >
> > > constituent[27]:
> > > file:/Users/mamir/apache-maven-3.6.1/lib/maven-embedder-3.6.1.jar
> > >
> > > constituent[28]:
> > > file:/Users/mamir/apache-maven-3.6.1/lib/maven-model-builder-3.6.1.jar
> > >
> > > constituent[29]:
> > > file:/Users/mamir/apache-maven-3.6.1/lib/checker-compat-qual-2.0.0.jar
> > >
> > > constituent[30]:
> > > file:/Users/mamir/apache-maven-3.6.1/lib/j2objc-annotations-1.1.jar
> > >
> > > constituent[31]:
> > >
> >
> file:/Users/mamir/apache-maven-3.6.1/lib/org.eclipse.sisu.inject-0.3.3.jar
> > >
> > > constituent[32]:
> > > file:/Users/mamir/apache-maven-3.6.1/lib/wagon-file-3.3.2.jar
> > >
> > > constituent[33]:
> > > file:/Users/mamir/apache-maven-3.6.1/lib/maven-model-3.6.1.jar
> > >
> > > constituent[34]:
> > > file:/Users/mamir/apache-maven-3.6.1/lib/maven-settings-3.6.1.jar
> > >
> > > constituent[35]:
> > > file:/Users/mamir/apache-maven-3.6.1/lib/maven-resolver-api-1.3.3.jar
> > >
> > > constituent[36]:
> > > file:/Users/mamir/apache-maven-3.6.1/lib/maven-
> > > resolver-connector-basic-1.3.3.jar
> > >
> > > constituent[37]:
> > > file:/Users/mamir/apache-maven-3.6.1/lib/animal-
> > > sniffer-annotations-1.14.jar
> > >
> > > constituent[38]:
> > >
> file:/Users/mamir/apache-maven-3.6.1/lib/maven-builder-support-3.6.1.jar
> > >
> > > constituent[39]:
> > > file:/Users/mamir/apache-maven-3.6.1/lib/maven-shared-utils-3.2.1.jar
> > >
> > > constituent[40]:
> > >
> >
> file:/Users/mamir/apache-maven-3.6.1/lib/org.eclipse.sisu.plexus-0.3.3.jar
> > >
> > > constituent[41]:
> > file:/Users/mamir/apache-maven-3.6.1/lib/jsr305-3.0.2.jar
> > >
> > > constituent[42]:
> > > file:/Users/mamir/apache-maven-3.6.1/lib/maven-core-3.6.1.jar
> > >
> > > constituent[43]: file:/Users/mamir/apache-maven-3.6.1/lib/javax.inject-
> > > 1.jar
> > >
> > > constituent[44]:
> > > file:/Users/mamir/apache-maven-3.6.1/lib/commons-lang3-3.8.1.jar
> > >
> > > constituent[45]:
> > > file:/Users/mamir/apache-maven-3.6.1/lib/guava-25.1-android.jar
> > >
> > > constituent[46]: file:/Users/mamir/apache-maven-3.6.1/lib/jsr250-api-1.
> > > 0.jar
> > >
> > > constituent[47]:
> > > file:/Users/mamir/apache-maven-3.6.1/lib/wagon-provider-api-3.3.2.jar
> > >
> > > ---------------------------------------------------
> > >
> > > Exception in thread "main" java.lang.Error:
> > > java.lang.reflect.InvocationTargetException
> > >
> > > at com.sun.tools.xjc.reader.Ring.get(Ring.java:113)
> > >
> > > at com.sun.tools.xjc.reader.xmlschema.BGMBuilder.<init>(
> > > BGMBuilder.java:147)
> > >
> > > at com.sun.tools.xjc.reader.xmlschema.BGMBuilder.build(
> > > BGMBuilder.java:117)
> > >
> > > at
> com.sun.tools.xjc.ModelLoader.annotateXMLSchema(ModelLoader.java:425)
> > >
> > > at com.sun.tools.xjc.ModelLoader.load(ModelLoader.java:174)
> > >
> > > at com.sun.tools.xjc.ModelLoader.load(ModelLoader.java:119)
> > >
> > > at com.sun.tools.xjc.Driver.run(Driver.java:333)
> > >
> > > at org.codehaus.mojo.jaxb2.AbstractXjcMojo.execute(
> > > AbstractXjcMojo.java:316)
> > >
> > > at
> > > org.apache.maven.plugin.DefaultBuildPluginManager.executeMojo(
> > > DefaultBuildPluginManager.java:137)
> > >
> > > at
> > > org.apache.maven.lifecycle.internal.MojoExecutor.execute(
> > > MojoExecutor.java:210)
> > >
> > > at
> > > org.apache.maven.lifecycle.internal.MojoExecutor.execute(
> > > MojoExecutor.java:156)
> > >
> > > at
> > > org.apache.maven.lifecycle.internal.MojoExecutor.execute(
> > > MojoExecutor.java:148)
> > >
> > > at
> > >
> org.apache.maven.lifecycle.internal.LifecycleModuleBuilder.buildProject(
> > > LifecycleModuleBuilder.java:117)
> > >
> > > at
> > >
> org.apache.maven.lifecycle.internal.LifecycleModuleBuilder.buildProject(
> > > LifecycleModuleBuilder.java:81)
> > >
> > > at
> > > org.apache.maven.lifecycle.internal.builder.singlethreaded.
> > > SingleThreadedBuilder.build(SingleThreadedBuilder.java:56)
> > >
> > > at
> > > org.apache.maven.lifecycle.internal.LifecycleStarter.
> > > execute(LifecycleStarter.java:128)
> > >
> > > at org.apache.maven.DefaultMaven.doExecute(DefaultMaven.java:305)
> > >
> > > at org.apache.maven.DefaultMaven.doExecute(DefaultMaven.java:192)
> > >
> > > at org.apache.maven.DefaultMaven.execute(DefaultMaven.java:105)
> > >
> > > at org.apache.maven.cli.MavenCli.execute(MavenCli.java:956)
> > >
> > > at org.apache.maven.cli.MavenCli.doMain(MavenCli.java:288)
> > >
> > > at org.apache.maven.cli.MavenCli.main(MavenCli.java:192)
> > >
> > > at
> java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke0(Native
> > > Method)
> > >
> > > at
> > > java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke(
> > > NativeMethodAccessorImpl.java:62)
> > >
> > > at
> > > java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(
> > > DelegatingMethodAccessorImpl.java:43)
> > >
> > > at java.base/java.lang.reflect.Method.invoke(Method.java:567)
> > >
> > > at
> > > org.codehaus.plexus.classworlds.launcher.Launcher.
> > > launchEnhanced(Launcher.java:282)
> > >
> > > at
> > > org.codehaus.plexus.classworlds.launcher.Launcher.
> > > launch(Launcher.java:225)
> > >
> > > at
> > > org.codehaus.plexus.classworlds.launcher.Launcher.
> > > mainWithExitCode(Launcher.java:406)
> > >
> > > at org.codehaus.plexus.classworlds.launcher.Launcher.
> > > main(Launcher.java:347)
> > >
> > > Caused by: java.lang.reflect.InvocationTargetException
> > >
> > > at
> > > java.base/jdk.internal.reflect.NativeConstructorAccessorImpl.
> > > newInstance0(Native
> > > Method)
> > >
> > > at
> > >
> java.base/jdk.internal.reflect.NativeConstructorAccessorImpl.newInstance(
> > > NativeConstructorAccessorImpl.java:62)
> > >
> > > at
> > > java.base/jdk.internal.reflect.DelegatingConstructorAccessorI
> > > mpl.newInstance(DelegatingConstructorAccessorImpl.java:45)
> > >
> > > at
> > > java.base/java.lang.reflect.Constructor.newInstanceWithCaller(
> > > Constructor.java:500)
> > >
> > > at java.base/java.lang.reflect.Constructor.newInstance(
> > > Constructor.java:481)
> > >
> > > at com.sun.tools.xjc.reader.Ring.get(Ring.java:102)
> > >
> > > ... 29 more
> > >
> > > Caused by: java.lang.Error: java.lang.reflect.InvocationTargetException
> > >
> > > at com.sun.tools.xjc.reader.Ring.get(Ring.java:113)
> > >
> > > at
> > > com.sun.tools.xjc.reader.xmlschema.BindingComponent.getClassSelector(
> > > BindingComponent.java:65)
> > >
> > > at
> > >
> >
> com.sun.tools.xjc.reader.xmlschema.ColorBinder.<init>(ColorBinder.java:62)
> > >
> > > at
> com.sun.tools.xjc.reader.xmlschema.BindGreen.<init>(BindGreen.java:63)
> > >
> > > ... 35 more
> > >
> > > Caused by: java.lang.reflect.InvocationTargetException
> > >
> > > at
> > > java.base/jdk.internal.reflect.NativeConstructorAccessorImpl.
> > > newInstance0(Native
> > > Method)
> > >
> > > at
> > >
> java.base/jdk.internal.reflect.NativeConstructorAccessorImpl.newInstance(
> > > NativeConstructorAccessorImpl.java:62)
> > >
> > > at
> > > java.base/jdk.internal.reflect.DelegatingConstructorAccessorI
> > > mpl.newInstance(DelegatingConstructorAccessorImpl.java:45)
> > >
> > > at
> > > java.base/java.lang.reflect.Constructor.newInstanceWithCaller(
> > > Constructor.java:500)
> > >
> > > at java.base/java.lang.reflect.Constructor.newInstance(
> > > Constructor.java:481)
> > >
> > > at com.sun.tools.xjc.reader.Ring.get(Ring.java:102)
> > >
> > > ... 38 more
> > >
> > > Caused by: java.lang.NoClassDefFoundError:
> > > javax/activation/MimeTypeParseException
> > >
> > > at java.base/java.lang.Class.getDeclaredConstructors0(Native Method)
> > >
> > > at java.base/java.lang.Class.privateGetDeclaredConstructors
> > > (Class.java:3143)
> > >
> > > at java.base/java.lang.Class.getConstructor0(Class.java:3348)
> > >
> > > at java.base/java.lang.Class.getDeclaredConstructor(Class.java:2559)
> > >
> > > at com.sun.tools.xjc.reader.Ring.get(Ring.java:100)
> > >
> > > at
> > > com.sun.tools.xjc.reader.xmlschema.DefaultClassBinder.<
> > > init>(DefaultClassBinder.java:98)
> > >
> > > at
> > > com.sun.tools.xjc.reader.xmlschema.ClassSelector.<init>
> > > (ClassSelector.java:214)
> > >
> > > ... 44 more
> > >
> > > Caused by: java.lang.ClassNotFoundException:
> > > javax.activation.MimeTypeParseException
> > >
> > > at
> > > org.codehaus.plexus.classworlds.strategy.SelfFirstStrategy.loadClass(
> > > SelfFirstStrategy.java:50)
> > >
> > > at
> > >
> org.codehaus.plexus.classworlds.realm.ClassRealm.unsynchronizedLoadClass(
> > > ClassRealm.java:271)
> > >
> > > at
> > > org.codehaus.plexus.classworlds.realm.ClassRealm.
> > > loadClass(ClassRealm.java:247)
> > >
> > > at
> > > org.codehaus.plexus.classworlds.realm.ClassRealm.
> > > loadClass(ClassRealm.java:239)
> > >
> > > ... 51 more
> > >
> > >
> > >
> > >
> > > I really appreciate any help.
> > >
> > > Thanks.
> > > Maral
> > >
> >
> >
> > --
> > Regards,
> > Gandhi
> >
> > "The best way to find urself is to lose urself in the service of others
> > !!!"
> >
>
