I'm following allong the guide at https://cwiki.apache.org/confluence/display/CTAKES/YTEX+Installation <https://cwiki.apache.org/confluence/display/CTAKES/YTEX+Installation>, which is the db install. I'm stuck at 7) Execute the setup script.
It is able to connect to the DB. Later on, it fails through with the error. It happens after nohup ../../ant -f build-setup.xml all > setup.out 2>&1 & tail -f setup.out Leander > On 3 Mar 2017, at 16:25, Dunlop, Joyce (HP) <joyce.dun...@va.gov> wrote: > > Remind me ... are you getting the error when you try to start YTEX web or run > the YTEX database install? > > -----Original Message----- > From: Leander Melms [mailto:me...@students.uni-marburg.de] > Sent: Friday, March 03, 2017 9:15 AM > To: dev@ctakes.apache.org > Subject: Re: [EXTERNAL] Re: YTEX User Inferace Users? > > Yes it is - I've got ehcache-core-2.4.6.jar in the lib folder. Any ideas why > ctakes can't find it? > > >> On 3 Mar 2017, at 16:04, Dunlop, Joyce (HP) <joyce.dun...@va.gov> wrote: >> >> You are right id does not need to be the parent pom if it was already >> included in the YTEX pom. >> >> Did you verify the ehcache-core jar is in the lib folder after you compile >> and package? >> >> >> >> -----Original Message----- >> From: Leander Melms [mailto:me...@students.uni-marburg.de] >> Sent: Friday, March 03, 2017 8:59 AM >> To: dev@ctakes.apache.org >> Subject: Re: [EXTERNAL] Re: YTEX User Inferace Users? >> >> Joyce, >> >> I've added >> >> <dependency> >> <groupId>net.sf.ehcache</groupId> >> <artifactId>ehcache-core</artifactId> >> <version>2.4.6</version> >> </dependency> >> >> to my pom file at the root dir. It is already included in the pom.xml of >> ./ctakes-ytex. It felt wrong, but I gave it a shot resulting in the same >> error. Where do I have to add the ehcache-core dependency? >> >> Leander >> >> >>> On 3 Mar 2017, at 15:16, Dunlop, Joyce (HP) <joyce.dun...@va.gov> wrote: >>> >>> Leander, >>> You are still making progress. >>> >>> Your next issue is... >>> >>> nested exception is java.lang.ClassNotFoundException: >>> org.springframework.cache.ehcache.EhCacheManagerFactoryBean >>> >>> It cannot find ehcache >>> >>> My pom has ehcache-core version 2.4.6 >>> >>> Joyce >>> >>> -----Original Message----- >>> From: Leander Melms [mailto:me...@students.uni-marburg.de] >>> Sent: Thursday, March 02, 2017 4:41 PM >>> To: dev@ctakes.apache.org >>> Subject: Re: [EXTERNAL] Re: YTEX User Inferace Users? >>> >>> I've modified the bin.xml accordingly and hibernate, weka and the mysql >>> connector are now available in the classpath! Thank you for your help. I >>> really appreciate that! >>> >>> But still, I'm getting the same output like before, complaining about >>> BeanCreationException: Error creating bean with name >>> 'kernelApplicationContext', BeanInstantiationException: Could not >>> instantiate bean class >>> [org.springframework.context.support.ClassPathXmlApplicationContext] and so >>> on. >>> >>> Any ideas what I'm doing wrong? >>> >>> [java] 02 Mar 2017 23:34:42 WARN ClassPathXmlApplicationContext - >>> Exception encountered during context initialization - cancelling refresh >>> attempt: org.springframework.beans.factory.BeanCreationException: Error >>> creating bean with name 'kernelApplicationContext' defined in URL >>> [jar:file:/Users/leandermelms/coding/ctakes-3.2.3-spring/lib/ctakes-ytex-web-3.2.3-SNAPSHOT-classes.jar!/org/apache/ctakes/ytex/kernelBeanRefContext.xml]: >>> Instantiation of bean failed; nested exception is >>> org.springframework.beans.BeanInstantiationException: Could not instantiate >>> bean class >>> [org.springframework.context.support.ClassPathXmlApplicationContext]: >>> Constructor threw exception; nested exception is >>> org.springframework.beans.factory.CannotLoadBeanClassException: Cannot find >>> class [org.springframework.cache.ehcache.EhCacheManagerFactoryBean] for >>> bean with name 'cacheManager' defined in class path resource >>> [org/apache/ctakes/ytex/beans-kernel.xml]; nested exception is >>> java.lang.ClassNotFoundException: >>> org.springframework.cache.ehcache.EhCacheManagerFactoryBean >>> [java] 02 Mar 2017 23:34:42 INFO DefaultListableBeanFactory - Destroying >>> singletons in >>> org.springframework.beans.factory.support.DefaultListableBeanFactory@7ed7259e: >>> defining beans [kernelApplicationContext]; root of factory hierarchy >>> [java] Exception in thread "main" java.lang.ExceptionInInitializerError >>> [java] at >>> org.apache.ctakes.ytex.tools.SetupAuiFirstWord.setupAuiFirstWord(SetupAuiFirstWord.java:190) >>> [java] at >>> org.apache.ctakes.ytex.tools.SetupAuiFirstWord.main(SetupAuiFirstWord.java:186) >>> [java] Caused by: >>> org.springframework.beans.factory.access.BootstrapException: Unable to >>> initialize group definition. Group resource name >>> [classpath*:org/apache/ctakes/ytex/kernelBeanRefContext.xml], factory key >>> [kernelApplicationContext]; nested exception is >>> org.springframework.beans.factory.BeanCreationException: Error creating >>> bean with name 'kernelApplicationContext' defined in URL >>> [jar:file:/Users/leandermelms/coding/ctakes-3.2.3-spring/lib/ctakes-ytex-web-3.2.3-SNAPSHOT-classes.jar!/org/apache/ctakes/ytex/kernelBeanRefContext.xml]: >>> Instantiation of bean failed; nested exception is >>> org.springframework.beans.BeanInstantiationException: Could not instantiate >>> bean class >>> [org.springframework.context.support.ClassPathXmlApplicationContext]: >>> Constructor threw exception; nested exception is >>> org.springframework.beans.factory.CannotLoadBeanClassException: Cannot find >>> class [org.springframework.cache.ehcache.EhCacheManagerFactoryBean] for >>> bean with name 'cacheManager' defined in class path resource >>> [org/apache/ctakes/ytex/beans-kernel.xml]; nested exception is >>> java.lang.ClassNotFoundException: >>> org.springframework.cache.ehcache.EhCacheManagerFactoryBean >>> [java] at >>> org.springframework.beans.factory.access.SingletonBeanFactoryLocator.useBeanFactory(SingletonBeanFactoryLocator.java:386) >>> [java] at >>> org.apache.ctakes.ytex.kernel.KernelContextHolder.<clinit>(KernelContextHolder.java:29) >>> [java] ... 2 more >>> [java] Caused by: >>> org.springframework.beans.factory.BeanCreationException: Error creating >>> bean with name 'kernelApplicationContext' defined in URL >>> [jar:file:/Users/leandermelms/coding/ctakes-3.2.3-spring/lib/ctakes-ytex-web-3.2.3-SNAPSHOT-classes.jar!/org/apache/ctakes/ytex/kernelBeanRefContext.xml]: >>> Instantiation of bean failed; nested exception is >>> org.springframework.beans.BeanInstantiationException: Could not instantiate >>> bean class >>> [org.springframework.context.support.ClassPathXmlApplicationContext]: >>> Constructor threw exception; nested exception is >>> org.springframework.beans.factory.CannotLoadBeanClassException: Cannot find >>> class [org.springframework.cache.ehcache.EhCacheManagerFactoryBean] for >>> bean with name 'cacheManager' defined in class path resource >>> [org/apache/ctakes/ytex/beans-kernel.xml]; nested exception is >>> java.lang.ClassNotFoundException: >>> org.springframework.cache.ehcache.EhCacheManagerFactoryBean >>> [java] at >>> org.springframework.beans.factory.support.ConstructorResolver.autowireConstructor(ConstructorResolver.java:285) >>> [java] at >>> org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.autowireConstructor(AbstractAutowireCapableBeanFactory.java:1077) >>> [java] at >>> org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBeanInstance(AbstractAutowireCapableBeanFactory.java:981) >>> [java] at >>> org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:485) >>> [java] at >>> org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:456) >>> [java] at >>> org.springframework.beans.factory.support.AbstractBeanFactory$1.getObject(AbstractBeanFactory.java:293) >>> [java] at >>> org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:223) >>> [java] at >>> org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:290) >>> [java] at >>> org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:191) >>> [java] at >>> org.springframework.beans.factory.support.DefaultListableBeanFactory.preInstantiateSingletons(DefaultListableBeanFactory.java:638) >>> [java] at >>> org.springframework.context.support.AbstractApplicationContext.finishBeanFactoryInitialization(AbstractApplicationContext.java:942) >>> [java] at >>> org.springframework.context.support.AbstractApplicationContext.refresh(AbstractApplicationContext.java:482) >>> [java] at >>> org.springframework.context.access.ContextSingletonBeanFactoryLocator.initializeDefinition(ContextSingletonBeanFactoryLocator.java:143) >>> [java] at >>> org.springframework.beans.factory.access.SingletonBeanFactoryLocator.useBeanFactory(SingletonBeanFactoryLocator.java:381) >>> [java] ... 3 more >>> [java] Caused by: org.springframework.beans.BeanInstantiationException: >>> Could not instantiate bean class >>> [org.springframework.context.support.ClassPathXmlApplicationContext]: >>> Constructor threw exception; nested exception is >>> org.springframework.beans.factory.CannotLoadBeanClassException: Cannot find >>> class [org.springframework.cache.ehcache.EhCacheManagerFactoryBean] for >>> bean with name 'cacheManager' defined in class path resource >>> [org/apache/ctakes/ytex/beans-kernel.xml]; nested exception is >>> java.lang.ClassNotFoundException: >>> org.springframework.cache.ehcache.EhCacheManagerFactoryBean >>> [java] at >>> org.springframework.beans.BeanUtils.instantiateClass(BeanUtils.java:163) >>> [java] at >>> org.springframework.beans.factory.support.SimpleInstantiationStrategy.instantiate(SimpleInstantiationStrategy.java:121) >>> [java] at >>> org.springframework.beans.factory.support.ConstructorResolver.autowireConstructor(ConstructorResolver.java:277) >>> [java] ... 16 more >>> [java] Caused by: >>> org.springframework.beans.factory.CannotLoadBeanClassException: Cannot find >>> class [org.springframework.cache.ehcache.EhCacheManagerFactoryBean] for >>> bean with name 'cacheManager' defined in class path resource >>> [org/apache/ctakes/ytex/beans-kernel.xml]; nested exception is >>> java.lang.ClassNotFoundException: >>> org.springframework.cache.ehcache.EhCacheManagerFactoryBean >>> [java] at >>> org.springframework.beans.factory.support.AbstractBeanFactory.resolveBeanClass(AbstractBeanFactory.java:1278) >>> [java] at >>> org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.predictBeanType(AbstractAutowireCapableBeanFactory.java:573) >>> [java] at >>> org.springframework.beans.factory.support.AbstractBeanFactory.isFactoryBean(AbstractBeanFactory.java:1347) >>> [java] at >>> org.springframework.beans.factory.support.AbstractBeanFactory.isFactoryBean(AbstractBeanFactory.java:913) >>> [java] at >>> org.springframework.beans.factory.support.DefaultListableBeanFactory.preInstantiateSingletons(DefaultListableBeanFactory.java:619) >>> [java] at >>> org.springframework.context.support.AbstractApplicationContext.finishBeanFactoryInitialization(AbstractApplicationContext.java:942) >>> [java] at >>> org.springframework.context.support.AbstractApplicationContext.refresh(AbstractApplicationContext.java:482) >>> [java] at >>> org.springframework.context.support.ClassPathXmlApplicationContext.<init>(ClassPathXmlApplicationContext.java:139) >>> [java] at >>> org.springframework.context.support.ClassPathXmlApplicationContext.<init>(ClassPathXmlApplicationContext.java:93) >>> [java] at >>> sun.reflect.NativeConstructorAccessorImpl.newInstance0(Native Method) >>> [java] at >>> sun.reflect.NativeConstructorAccessorImpl.newInstance(NativeConstructorAccessorImpl.java:62) >>> [java] at >>> sun.reflect.DelegatingConstructorAccessorImpl.newInstance(DelegatingConstructorAccessorImpl.java:45) >>> [java] at >>> java.lang.reflect.Constructor.newInstance(Constructor.java:423) >>> [java] at >>> org.springframework.beans.BeanUtils.instantiateClass(BeanUtils.java:148) >>> [java] ... 18 more >>> [java] Caused by: java.lang.ClassNotFoundException: >>> org.springframework.cache.ehcache.EhCacheManagerFactoryBean >>> [java] at java.net.URLClassLoader.findClass(URLClassLoader.java:381) >>> [java] at java.lang.ClassLoader.loadClass(ClassLoader.java:424) >>> [java] at sun.misc.Launcher$AppClassLoader.loadClass(Launcher.java:331) >>> [java] at java.lang.ClassLoader.loadClass(ClassLoader.java:357) >>> [java] at >>> org.springframework.util.ClassUtils.forName(ClassUtils.java:268) >>> [java] at >>> org.springframework.beans.factory.support.AbstractBeanDefinition.resolveBeanClass(AbstractBeanDefinition.java:419) >>> [java] at >>> org.springframework.beans.factory.support.AbstractBeanFactory.doResolveBeanClass(AbstractBeanFactory.java:1299) >>> [java] at >>> org.springframework.beans.factory.support.AbstractBeanFactory.resolveBeanClass(AbstractBeanFactory.java:1270) >>> [java] ... 31 more >>> >>> BUILD FAILED >>> >>> Leander >>>> On 2 Mar 2017, at 22:45, Dunlop, Joyce (HP) <joyce.dun...@va.gov> wrote: >>>> >>>> hibernate >>> >>> >> >> > >
