Hello.

I've also started to take a look.

There are issues with the expected functionality of the "examples-ga" module.

Assuming that the following command has been issued
  $ JAVA_HOME=/usr/lib/jvm/java-8-openjdk-amd64/ mvn package
and has completed successfully, executable JAR files should have been
created under the "target" directories.

For example, issuing this command (example for the "neuralnet" module):
  $ java -jar 
commons-math-examples/examples-sofm/tsp/target/examples-sofm-tsp.jar
outputs
---CUT---
Missing required option '-o=outputFile'
Usage: <main class> [-hV] [-j=numJobs] [-m=maxTrials] [-n=neuronsPerCity]
                    -o=outputFile [-s=numSamples]
Run the application
  -h, --help           Show this help message and exit.
  -j=numJobs           Number of concurrent tasks (default: 8).
  -m=maxTrials         Maximal number of trials (default: 10).
  -n=neuronsPerCity    Average number of neurons per city (default: 2.2).
  -o=outputFile        Output file name.
  -s=numSamples        Number of samples for the training (default: 2000).
  -V, --version        Print version information and exit.
---CUT---

The above thus shows that the program runs as expected (passing the missing
required argument produces the expected output file).

Doing the equivalent for the new examples, e.g.
  $ java -jar 
commons-math-examples/examples-ga/examples-ga-tsp/target/examples-ga-mathfunctions.jar
results in
---CUT---
Exception in thread "main" java.lang.UnsatisfiedLinkError: Can't load
library: /usr/lib/jvm/java-11-openjdk-amd64/lib/libawt_xawt.so
    at java.base/java.lang.ClassLoader.loadLibrary(ClassLoader.java:2630)
    at java.base/java.lang.Runtime.load0(Runtime.java:768)
    at java.base/java.lang.System.load(System.java:1837)
    at java.base/java.lang.ClassLoader$NativeLibrary.load0(Native Method)
    at java.base/java.lang.ClassLoader$NativeLibrary.load(ClassLoader.java:2442)
    at 
java.base/java.lang.ClassLoader$NativeLibrary.loadLibrary(ClassLoader.java:2498)
    at java.base/java.lang.ClassLoader.loadLibrary0(ClassLoader.java:2694)
    at java.base/java.lang.ClassLoader.loadLibrary(ClassLoader.java:2648)
    at java.base/java.lang.Runtime.loadLibrary0(Runtime.java:830)
    at java.base/java.lang.System.loadLibrary(System.java:1873)
    at java.desktop/java.awt.Toolkit$3.run(Toolkit.java:1399)
    at java.desktop/java.awt.Toolkit$3.run(Toolkit.java:1397)
    at java.base/java.security.AccessController.doPrivileged(Native Method)
    at java.desktop/java.awt.Toolkit.loadLibraries(Toolkit.java:1396)
    at java.desktop/java.awt.Toolkit.<clinit>(Toolkit.java:1429)
    at java.desktop/java.awt.Component.<clinit>(Component.java:621)
    at 
org.apache.commons.math4.examples.ga.tsp.TSPOptimizer.main(TSPOptimizer.java:62)
---CUT---

[Please note that the name of the JAR also looks wrong (a copy/paste mistake?).]

Command
  $ java -jar 
commons-math-examples/examples-ga/examples-ga-math-functions/target/examples-ga-mathfunctions.jar
also fails, with the following error
---CUT---
Error: Could not find or load main class
org.apache.commons.math4.examples.ga.mathfunctions.Dimension2FunctionOptimizer
Caused by: java.lang.ClassNotFoundException:
org.apache.commons.math4.examples.ga.mathfunctions.Dimension2FunctionOptimizer
---CUT---

I noticed that there is an example relating to "Dimension2" and another
to "DimensionN".  Isn't the former, in principle, a special case of the latter?


Regards,
Gilles

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