Hello folks,

There is a lot of work in API design. However, Konstantin's point is that
it takes a lot of effort to convince Gilles of any alternatives. API design
issues should really be second to functionality. This idea seems to be lost
in conversations.

I agree with Gilles that providing tests and benchmarks that exhibit the
advantages of a particular method are probably the best way to show other
contributors the value of an alternative approach.

It is quite depressing to the contributor to see one's contribution be
rejected when efficiency/accuracy improvements are demonstrated. In a
better world, rejecting a patch that passes the hurdle of demonstrating an
efficiency improvement over existing code should come with a responsibility
of showing alternate tests that the patch fails and the original code
passes. Otherwise, the patch should be accepted by default. The person who
commits or designed the API is free to make changes to fit API design.

Just like API designers are not experts at the underlying math,
contributors are not necessarily experts at the underlying API design. To
unlock the efficiency of open source, contributor morale needs to be
considered and classes that pass tests should really be accepted.

For example, Performance AND accuracy improvements to existing algorithm
were demonstrated for AdaptiveQuadrature in my patches to MATH-995
The only joy I got out of that was Gilles putting a comment in the docs for
the existing class:
"The Javadoc now draws attention that the [existing] algorithm is not 100%
fool-proof."!
Also, I was asked to open a new issue about Adaptive Quadratures to figure
out what is the best quadratue method ... all while a patch that is a clear
improvement over existing code wastes away. Why not accept the patch and
make improvements as necessary?

My impression since that patch was rejected, is that it just seems like a
huge hurdle to get any patch past the API design requirements that are
frankly not as clear to me as it is to the designer. I can see how others
feel the same way.

Cheers,
Ajo.

Gilles: if you don't want to end up spending time developing Gauss-Hermite
quadrature or something else you don't really need, perhaps you should
consider accepting/modifying code that was shown to work by someone who
needed that functionality. It is reasonable to develop alternatives to fix
flaws/gaps, but otherwise its your effort wasted.  If someone's
contribution doesn't fit your view of the API, then by all means edit the
patch, but if you go about rejecting things that work, there won't be as
many contributors to CM.






On Thu, Jul 18, 2013 at 10:08 AM, Roger L. Whitcomb <
roger.whitc...@actian.com> wrote:

> As an outsider listening to these discussions, it seems like:
> a) *IF* there are problems with the current arrangement of packages, APIs,
> or whatever, then a constructive approach would be for the one who sees
> such problems to take the time to not just criticize and point out "flaws",
> but to dig in and rearrange the packages, redo the APIs, provide unit
> tests, and submit a patch with these changes, along with quantitative
> justification, benchmarks, test cases, etc.  It is quite easy to criticize,
> from the sidelines, the one who is actually doing the work, but quite
> another matter to roll up your sleeves and join in the work....
> b) Since Math is a "library", it seems like there needs to be
> implementations of many different algorithms, since (quite clearly) not
> every algorithm is suited to every problem.  To say that X method doesn't
> work well for problem Y, is not necessarily a reason to rewrite X method,
> if that method is correctly implementing the algorithm.  Maybe the
> algorithm is simply not the right one to use for the problem.
> c) Comments that imply (or state outright) that someone who has (clearly)
> done a lot of work has done it "...without much thinking..." are clearly
> out of line.  In my experience, the only reason to resort to name calling
> and character assassination is because one has no worthy arguments to put
> forward.
> d) Kudos to the Commons committers who have been doing the work ...
>
> My 2 cents...
>
> ~Roger Whitcomb
> Apache Pivot PMC Chair
>
> -----Original Message-----
> From: Gilles [mailto:gil...@harfang.homelinux.org]
> Sent: Thursday, July 18, 2013 9:35 AM
> To: dev@commons.apache.org
> Subject: Re: [Math] Cleaning up the curve fitters
>
> On Thu, 18 Jul 2013 11:47:03 -0400, Konstantin Berlin wrote:
> > I appreciate the comment. I would like to help, but currently my
> > schedule is full. Maybe towards the end of the year.
> >
> > I think the first approach should be do no harm. The optimization
> > package keeps getting refactored every few months without much
> > thinking involved. We had the discuss previously, with Gilles
> > unilaterally deciding on the current tree, which he now wants to
> > change again.
>
> As I said,
> as Luc said,
> as Phil said,
> again and again and again,
> we are not optimization (as a scientific field) experts here, but we do
> use Commons Math in scientific code that is pretty compute intensive (and
> yes, maybe not in the same sense as you'd like it to be for your comfort).
> Current code has, and may still have problems, but we see them only
> through running unit tests, running our applications, running code examples
> submitted by issue reporters.
> We improve what we can, given time and motivation constraints.
> Other than that, there is nothing.
>
> Yes, we already had that asymmetrical conversation where _you_ declare
> what _we_ should do.
>
> > As someone who uses optimization regular I would say the current API
> > state (not just package naming) leaves a lot to be desired, and is not
> > amenable to the various modification that people might need for larger
> > problems. So if you are going to modify it, you should at least open
> > up the API to the possibility that different optimization steps can be
> > done using various techniques, depending on the problem.
> >
> > We should also accept that not everything can fit neatly into a
> > package tree and a single set of APIs. A good example is least
> > squares. Linear least squares does not require an initial guess at a
> > solution, and by performing decomposition ahead of time you can
> > quickly recompute the solution given different input values. However,
> > an iterative least squares method might not have these properties.
> > There are probably countless of other examples.
> >
> > Because optimization problems are really computationally hard all the
> > little specific differences matter, that is why Gilles approach of
> > sweeping everything under the rug and into some rigid not thought out
> > hierarchical API forces these methods to adapt (or drop) numerical
> > aspects that should not be there (e.x. polynomial fits). This has
> > *huge* performance implications, but the issue is treated as some OO
> > design 101 class, with the focus on how to force everything into a
> > simple inheritance structure, numerics be damned.
> >
> > I would gladly help with the feedback when I can. Ajo and I provided
> > code for adaptive integration, yet the whole issue was completely
> > ignored. So I am not sure how much effort is required for the
> > developers to take an idea or mostly completed code and make a change,
> > rather than reject even the most basic numerical approaches that are
> > taught in introduction classes as something that needs to be
> > benchmarked.
>
> As usual, you are mixing everything, from algorithms to implementations,
> from proposing new features to denigrating existing ones (with non-existent
> or inappropriate use-cases), from numerical to efficiency considerations...
> [On top of it, you blatantly affirm that this issue has been ignored, even
> as I provided[1] an analysis[2] of what was actually happening.
> People like you seem to ignore that we work benevolently on this project!]
> Not even speaking of derogatory remarks like "sweeping [...] under the rug"
> and "not thought out" and insinuating that everything was better and more
> efficient before. Which is simply not true.
>
> It's an asymmetrical discussion because you declare that half-baked code
> is good enough and _we_ have to work even more than if we'd have to
> implement the feature from scratch.
>
>
> Gilles
>
> [1] In the spare time I do _not_ have either.
> [2] Which dragged me to the implementation of the Gauss-Hermite quadrature
>      scheme (although I had no personal use of it), which seems to be the
>      appropriate way to deal with the improper integral reported in the
>      issue which you refer to.
>
>
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