[Andreas Tille, 2014-03-04]
> I tried to work on python-biopython which according to authors request
> supports also Python3 and so I tried to put this into the packaging at
>
> svn://anonscm.debian.org/debian-med/trunk/packages/python-biopython/trunk/
^ this one is not anonymous, this one is:
svn://anonscm.debian.org/svn/debian-med/trunk/packages/python-biopython/trunk/
(which is weird, I was sure it's the other way around)
> The problem is that I seem to have messed up the debian/*.install files
> in a way that Python2 packages will be moved to the python3 package and
> the other way around - but I have no idea why. I seem to need those
> install files since the other method to simply put
>
> export PYBUILD_DESTDIR_python2=debian/python-biopython/
> export PYBUILD_DESTDIR_python3=debian/python3-biopython/
FTR: this requires less typing:
export PYBUILD_NAME=biopython
anyway, you cannot mix .install files and pybuild's DESTDIR, dh_install
will not find files already installed in the final location AFAIR
> into debian/rules does not separate the Bio module from BioSQL (and I
> have no idea how to do this properly).
you can force pybuild to move BioSQL files to a different location
(hint: --ext-dest-dir & --ext-pattern or equivalent PYBUILD_* vars)
but IMO it's cleaner to use *.install files for that
[...]
> 2. Tests are not run. Log just says
>
> dh_auto_test -O--buildsystem=pybuild
> pybuild --test -i python{version} -p 2.7 --dir .
> I: pybuild base:170: cd
> /tmp/buildd/python-biopython-1.63/.pybuild/pythonX.Y_2.7/build; python2.7 -m
> unittest discover -v
another pybuild example (without magic PYBUILD_* vars this time):
override_dh_auto_test:
dh_auto_test -- --test --system=custom --test-args='env
PYTHONPATH={build_dir} {interpreter} setup.py test'
(pybuild didn't detect that it should simply invoke setup.py's test
because "test_suite" is not declared in setup.py. Standards... eh, why
there are some many of them in Python distutils world?)
PS please add "X-Python-Version: >= 3.3" in debian/control, this module
doesn't work with 3.2
--
Piotr Ożarowski Debian GNU/Linux Developer
www.ozarowski.pl www.griffith.cc www.debian.org
GPG Fingerprint: 1D2F A898 58DA AF62 1786 2DF7 AEF6 F1A2 A745 7645
--
To UNSUBSCRIBE, email to debian-python-requ...@lists.debian.org
with a subject of "unsubscribe". Trouble? Contact listmas...@lists.debian.org
Archive: https://lists.debian.org/20140304162651.gh28...@sts0.p1otr.com
