Hi,
I tried to work on python-biopython which according to authors request
supports also Python3 and so I tried to put this into the packaging at
svn://anonscm.debian.org/debian-med/trunk/packages/python-biopython/trunk/
The problem is that I seem to have messed up the debian/*.install files
in a way that Python2 packages will be moved to the python3 package and
the other way around - but I have no idea why. I seem to need those
install files since the other method to simply put
export PYBUILD_DESTDIR_python2=debian/python-biopython/
export PYBUILD_DESTDIR_python3=debian/python3-biopython/
into debian/rules does not separate the Bio module from BioSQL (and I
have no idea how to do this properly).
I also have two additional problems
1. numpy
While
dh_numpy -ppython-biopython
does create the proper Dependencies in the python-biopython package
dh_numpy3 -ppython3-biopython
does not have any visible effect on the dependencies - in any cas
python3-biopython does not feature a python3-numpy dependency
2. Tests are not run. Log just says
dh_auto_test -O--buildsystem=pybuild
pybuild --test -i python{version} -p 2.7 --dir .
I: pybuild base:170: cd
/tmp/buildd/python-biopython-1.63/.pybuild/pythonX.Y_2.7/build; python2.7 -m
unittest discover -v
----------------------------------------------------------------------
Ran 0 tests in 0.000s
OK
pybuild --test -i python{version} -p "3.3 3.4" --dir .
I: pybuild base:170: cd
/tmp/buildd/python-biopython-1.63/.pybuild/pythonX.Y_3.3/build; python3.3 -m
unittest discover -v
----------------------------------------------------------------------
Ran 0 tests in 0.000s
OK
I: pybuild base:170: cd
/tmp/buildd/python-biopython-1.63/.pybuild/pythonX.Y_3.4/build; python3.4 -m
unittest discover -v
----------------------------------------------------------------------
Ran 0 tests in 0.000s
OK
Any help would be appreciated.
Kind regards
Andreas.
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