On 9/5/22 23:50, Mohd Bilal wrote:
Hello team,

I tried adding autopkgtest for kmerresistance[1] but I'm getting an error when 
using the installed binary.

I'm not able to run the binary with example data[2] from the package installed 
via apt

But I'm able to run the command as expected if I built the binary from source

I've attached the two cases in the paste.d.n link[3].

I guess this has something to do with the buildflags that are passed[4] during 
build but I have no idea what is causing this behaviour. Can anyone look into 
this and suggest a fix ?

After cloning your data, even a simple `cd` takes ages to get into test 
directory for me, no idea what is up, but I am not
able to test/run anything from your data.

Regarding your error, taking a wild guess, maybe it is because of the "-O3" 
that is being passed from debhelper buildflags.
Can you try building debian package without patching this line[5] and check?

[1] - https://salsa.debian.org/med-team/kmerresistance
[2] - https://gitlab.com/mdb571/kmerresistance_test
[3] - http://paste.debian.net/1252849/
[4] - https://salsa.debian.org/med-team/kmerresistance/-/jobs/2340952#L569
[5]: 
https://salsa.debian.org/med-team/kmerresistance/-/blob/master/debian/patches/hardening.patch


--
Best,
Nilesh

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