Hi Pierre,
very nice. Seems you had some progress with this long term
goal!
Thanks a lot
Andreas.
On Tue, Mar 30, 2021 at 12:24:18PM +0200, Pierre Gruet wrote:
> Package: wnpp
> Severity: wishlist
> Owner: Debian-med team <debian-med@lists.debian.org>
> X-Debbugs-Cc: debian-de...@lists.debian.org, debian-med@lists.debian.org
>
> * Package name : snpeff
> Version : 4.3t
> Upstream Author : Pablo Cingolani <pcing...@users.sourceforge.net>
> * URL : https://pcingola.github.io/SnpEff/
> * License : LGPL-3
> Programming Lang: Java
> Description : genetic variant annotation and effect prediction toolbox
>
> SnpEff is a variant annotation and effect prediction tool. It annotates
> and predicts the effects of variants on genes (such as amino acid
> changes).
>
> The inputs are predicted variants (SNPs, insertions, deletions and
> MNPs). The input file is usually obtained as a result of a sequencing
> experiment, and it is usually in variant call format (VCF).
>
> SnpEff analyzes the input variants. It annotates the variants and
> calculates the effects they produce on known genes (e.g. amino acid
> changes).
>
>
> This software is needed in many workflows in the Debian-med team. It will be
> maintained inside the team.
>
>
--
http://fam-tille.de
