Hi Étienne, On Tue, Jun 16, 2020 at 10:41:28PM +0200, Étienne Mollier wrote: > I pushed a little change in the d/control file of the package > python-biopython in version 1.77+dfsg-2. This was the suggested > way to address the bug #962944: > > https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=962944 > > I couldn't reproduce any particular problem with the few last > rounds of `gbp buildpackage` and `autopkgtest`, and `lintian` > has nothing outstanding to complain about, so it is ready for > review.
I've just uploaded (today the build went smoothly). > Unfortunately, the PhyML issue below is left aside for the > moment. As far as I can see this was the urgent issue that was reflected in a RC bug that should be fixed quickly. > Steffen Möller, on 2020-06-12 19:40:37 +0200: > > FAIL: test_phyml (test_phyml_tool.AppTests) > > Run PhyML using the wrapper. > > ---------------------------------------------------------------------- > > Traceback (most recent call last): > > File > > "/home/moeller/git/med-team/python-biopython/.pybuild/cpython3_3.8/build/Tests/test_phyml_tool.py", > > line 51, in test_phyml > > self.assertEqual(len(err), 0) > > AssertionError: 192 != 0 > > It is sad to only have the length of the error message, so I > tried to get the full error message with a litte patch for > debug, but have been at loss to reproduce the PhyML issue after > having reduced my pid_max to not be affected by #962974 anymore; > I am wondering if the two problems are related somehow, or if I > just didn't trigger the test in the proper environment. > > https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=962974 Thanks a lot for your investigation Andreas. -- http://fam-tille.de
