Ouch, sorry! I first planned to write also a bit about python-cyvcf2 that
is why I included it in the Subjest. Then I decided to devote to it a
separate letter, but forgot to remove it from the Subject.

Since this has happened, I am to mention cyvcf2 here.

On Sun, 8 Jul 2018 at 01:23 Steffen Möller <[email protected]> wrote:

>  - cyvcf2 is in a new version 0.9.0 now, but, well, tests fail.


There was a new upstream version recently in which one of the tests
(issue44) was supposed to be fixed, but hadn't yet [1]. I tried to dig into
this and its other test failures, but they seem to be quite tricky for me.
So I think, Steffen's claim for someone's help with cyvcf2 and its
dependency htslib still remains on the table:


> It comes
> with its own version of htslib, which may well contribute to the
> situation since I had nothing better to do than to substitute it with
> the one the distribution ships. Is anybody close to upstream on this
> list to have a look?


With regards,
Liubov

[1] https://github.com/brentp/cyvcf2/issues/89#issuecomment-406354822

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