Le Tue, Feb 07, 2012 at 10:14:20AM -0500, Carlos Borroto a écrit : > > I see your point but I think Depends is more appropriate. If someone > wants to use their own bowtie, I think they could still accomplish > that playing with $PATH. I also checked on the TopHat package from Tim > Booth at NEBC's PPA[1] and they are using Depends. I guess it would be > nice to keep the packages in sync for a future merge. > > BTW, the NEBC team is doing a very nice work packaging most of the > Tools a local install of Galaxy[2] would need. This is exactly what > got me interested in Debian packaging. > > [1]https://launchpad.net/~nebc/+archive/galaxy > [2]htt[://galaxyproject.org
Hi Carlos, it would be very exiting to see Galaxy packaged in Debian. Please go ahead with Depends: bowtie. I see that you also added Recommends: cufflinks. This is not possible as cufflinks is very unfortunately non-free. Also, if nothing in the tophat package calls programs from the cufflinks package, the relationship would rather be that tophat Enhances: cufflinks and cufflinks Depends: tophat. Have a nice day, -- Charles Plessy Tsurumi, Kanagawa, Japan -- To UNSUBSCRIBE, email to [email protected] with a subject of "unsubscribe". Trouble? Contact [email protected] Archive: http://lists.debian.org/[email protected]
