hello Andreas, Felix Natter <fnat...@gmx.net> writes: >> symbol: method getRank() >> location: variable COMM_WORLD of type Intracomm >> current/stream/mpi/MPIWrapper.java:49: error: cannot find symbol >> Shared.MPI_NUM_RANKS=MPI.COMM_WORLD.getSize(); >> ^ >> symbol: method getSize() > > It looks like bbmap requires the methods getRank() and getSize() > on mpi.Intracomm, and this method does not seem to be available in > mpj-0.42+dfsg. > (I couldn't find it in mpj-0.44 either [3] [4]) > > [3] https://sourceforge.net/projects/mpjexpress/files/ > [4] http://mpjexpress.org/docs/javadocs/mpi/Intracomm.html > > Maybe we should ask the mpjexpress folks which > mpjexpress to use or how to fix/patch bbmap [5]?
I think we need to use Size() [1], Rank() [2] etc (probably all methods starting with a capital letter): [1] http://mpjexpress.org/docs/javadocs/mpi/Comm.html#Size%28%29 [2] http://mpjexpress.org/docs/javadocs/mpi/Comm.html#Rank%28%29 Can you patch this? Cheers and Best Regards, -- Felix Natter
