Package: wnpp Severity: wishlist Owner: Andreas Tille <ti...@debian.org>
* Package name : gwamar Version : 1.15.1 Upstream Author : Michał Woźniak <m.wozn...@mimuw.edu.pl> * URL : http://bioputer.mimuw.edu.pl/gwamar/ * License : GPL Programming Lang: Python Description : genome-wide assessment of mutations associated with drug resistance in bacteria GWAMAR is a tool for detecting of drug resistance-associated mutations in bacteria through comparative analysis of whole-genome sequences. The pipeline of GWAMAR comprises several steps. First, for a set of closely related bacterial genomes, it employs eCAMBer to identify homologous gene families. Second, based on multiple alignments of the gene families, it identifies mutations among the strains of interest. Third, it calculates several statistics to identify which mutations are the most associated with drug resistance.
