Your message dated Tue, 20 Feb 2018 16:05:04 +0000 with message-id <e1eoapg-0002kc...@fasolo.debian.org> and subject line Bug#890704: fixed in bcftools 1.7-2 has caused the Debian Bug report #890704, regarding bcftools FTBFS on 32bit: test_vcf_query failure to be marked as done.
This means that you claim that the problem has been dealt with. If this is not the case it is now your responsibility to reopen the Bug report if necessary, and/or fix the problem forthwith. (NB: If you are a system administrator and have no idea what this message is talking about, this may indicate a serious mail system misconfiguration somewhere. Please contact ow...@bugs.debian.org immediately.) -- 890704: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=890704 Debian Bug Tracking System Contact ow...@bugs.debian.org with problems
--- Begin Message ---Source: bcftools Version: 1.7-1 Severity: serious https://buildd.debian.org/status/package.php?p=bcftools&suite=sid ... test_vcf_query: /<<PKGBUILDDIR>>/bcftools query -f'[%POS %SAMPLE %AD\n]\n' -i'AD[:0]+AD[:1] > 12' /tmp/VDxYjli8aH/filter.5.vcf.gz malloc(): memory corruption The outputs differ: /<<PKGBUILDDIR>>/test/query.54.out /<<PKGBUILDDIR>>/test/query.54.out.new .. failed ... ... Number of tests: total .. 795 passed .. 794 failed .. 1 Makefile:246: recipe for target 'test-plugins' failed make[1]: *** [test-plugins] Error 1
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--- Begin Message ---Source: bcftools Source-Version: 1.7-2 We believe that the bug you reported is fixed in the latest version of bcftools, which is due to be installed in the Debian FTP archive. A summary of the changes between this version and the previous one is attached. Thank you for reporting the bug, which will now be closed. If you have further comments please address them to 890...@bugs.debian.org, and the maintainer will reopen the bug report if appropriate. Debian distribution maintenance software pp. Andreas Tille <ti...@debian.org> (supplier of updated bcftools package) (This message was generated automatically at their request; if you believe that there is a problem with it please contact the archive administrators by mailing ftpmas...@ftp-master.debian.org) -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA256 Format: 1.8 Date: Tue, 20 Feb 2018 16:32:47 +0100 Source: bcftools Binary: bcftools Architecture: source Version: 1.7-2 Distribution: unstable Urgency: medium Maintainer: Debian Med Packaging Team <debian-med-packag...@lists.alioth.debian.org> Changed-By: Andreas Tille <ti...@debian.org> Description: bcftools - genomic variant calling and manipulation of VCF/BCF files Closes: 890704 Changes: bcftools (1.7-2) unstable; urgency=medium . * Team upload. * Follow hint of Graham Inggs to skip single test that is new in this version Closes: #890704 Checksums-Sha1: 39e4f95c9515e97e3d463458c8d9097c7ba87531 2114 bcftools_1.7-2.dsc 104ea95504e3d86d787acc7e2ebc25bbfc8b7419 5904 bcftools_1.7-2.debian.tar.xz Checksums-Sha256: caaff4ade46acfb315596485bd73befde6d291082d4e23d19c66f8433878260b 2114 bcftools_1.7-2.dsc e1bef774a33f4b8722d70c7a2f209538d0a16296789f4aec92d85fb8feafbcaf 5904 bcftools_1.7-2.debian.tar.xz Files: 4cc87e0275d2148625e1a2144eba5c1a 2114 science optional bcftools_1.7-2.dsc cf8dfcf89122f43ffe679f8ce13eedb3 5904 science optional bcftools_1.7-2.debian.tar.xz -----BEGIN PGP SIGNATURE----- iQJFBAEBCAAvFiEE8fAHMgoDVUHwpmPKV4oElNHGRtEFAlqMRBcRHHRpbGxlQGRl Ymlhbi5vcmcACgkQV4oElNHGRtGaVQ/8CMyve/NcXzsZIf08M4XpUiTzDDtdLKsq TkjTiB36niD+SC+LpqbgckLQsxCLzicO6uzAAu/h+1sZaZJLvFyQPBUrdJIAWbgy vFFESC+Dpjz2cI0leWgl3/M1TzAFVA9nd63NF4QFN9r98VE2fHExthZncjW7Jkgg OjkDMhg9APmSp5MMBJa4jQkAuSEaW7fAVs6gX1rf/INH0JNuOCPEMf5YdDYbVQfM 0rDyAyWaQs1rySZZI9Arru3RIGtrzjvN07nKDDb1tG5maiVvy5++obDvvfxSpO7F 6PH/VGUN3d183vl0ZxLy7GXDm76loo2tbhy4SSi18JrJGWUCs3SZ2A9Q91uV5ZDV id7uXdnMSDbG0swv909BXCygFKMJcna3PDbyC/nc07qTM84CP3SaGAPTgfleTJ+n wEJv9nHypcqq0rBiK6wTy7R7eLhI9bKSEG+N29NHHgI5N6rQ63UdvJLkFp40AbzF LpRnHRwo8WmmWKheTzKchdVPf6lrmhRRRfdfxGnxuLeGBzuNzFxw94H74kvbl+v0 848B22fgTT7XFUa5u8FE7jh5A6+6BYiCi2SSu80gm3r4Yt3qZCsfvC55IAk20cjB ybAZJNAXRVgBVH4IP3PZ6Un/YntSQ9SQscOMAc1/Qy8hpr/WVKFZ4+Gerhr14oZR w7VuAFX/Rsk= =hH/B -----END PGP SIGNATURE-----
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