Your message dated Sat, 16 Feb 2013 09:48:04 +0000 with message-id <[email protected]> and subject line Bug#700525: fixed in sundials 2.5.0-2 has caused the Debian Bug report #700525, regarding sundials: several binary packages not linked properly against blas and lapack to be marked as done.
This means that you claim that the problem has been dealt with. If this is not the case it is now your responsibility to reopen the Bug report if necessary, and/or fix the problem forthwith. (NB: If you are a system administrator and have no idea what this message is talking about, this may indicate a serious mail system misconfiguration somewhere. Please contact [email protected] immediately.) -- 700525: http://bugs.debian.org/cgi-bin/bugreport.cgi?bug=700525 Debian Bug Tracking System Contact [email protected] with problems
--- Begin Message ---Package: sundials Version: 2.5.0-1 Severity: normal even though lapack is in the build dependencies and is picked up by the configure step it is not linked against the libraries that need it and is thus also lacking a binary dependency: ldd -r /usr/lib/libsundials_cvodes.so.2 linux-vdso.so.1 => (0x00007fff77dff000) /usr/lib/libeatmydata/libeatmydata.so (0x00007f8a152e4000) /usr/lib/cowdancer/libcowdancer.so (0x00007f8a150e0000) libm.so.6 => /lib/x86_64-linux-gnu/libm.so.6 (0x00007f8a14e5b000) libc.so.6 => /lib/x86_64-linux-gnu/libc.so.6 (0x00007f8a14ad1000) libdl.so.2 => /lib/x86_64-linux-gnu/libdl.so.2 (0x00007f8a148cd000) /lib64/ld-linux-x86-64.so.2 (0x00007f8a1571c000) undefined symbol: dcopy_ (/usr/lib/libsundials_cvodes.so.2) undefined symbol: dscal_ (/usr/lib/libsundials_cvodes.so.2) undefined symbol: dgbtrs_ (/usr/lib/libsundials_cvodes.so.2) undefined symbol: dgbtrf_ (/usr/lib/libsundials_cvodes.so.2) undefined symbol: dgetrf_ (/usr/lib/libsundials_cvodes.so.2) undefined symbol: dgetrs_ (/usr/lib/libsundials_cvodes.so.2) see also: https://bugs.launchpad.net/ubuntu/+source/sundials/+bug/1124062
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--- Begin Message ---Source: sundials Source-Version: 2.5.0-2 We believe that the bug you reported is fixed in the latest version of sundials, which is due to be installed in the Debian FTP archive. A summary of the changes between this version and the previous one is attached. Thank you for reporting the bug, which will now be closed. If you have further comments please address them to [email protected], and the maintainer will reopen the bug report if appropriate. Debian distribution maintenance software pp. Christophe Trophime <[email protected]> (supplier of updated sundials package) (This message was generated automatically at their request; if you believe that there is a problem with it please contact the archive administrators by mailing [email protected]) -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA1 Format: 1.8 Date: Fri, 15 Feb 2013 11:40:09 +0100 Source: sundials Binary: libsundials-serial libsundials-cvode1 libsundials-cvodes2 libsundials-ida2 libsundials-idas0 libsundials-kinsol1 libsundials-nvecserial0 libsundials-serial-dev octave-sundials Architecture: source amd64 Version: 2.5.0-2 Distribution: unstable Urgency: low Maintainer: Debian Science Team <[email protected]> Changed-By: Christophe Trophime <[email protected]> Description: libsundials-cvode1 - ordinary differentialequation solver (SUNDIALS library) libsundials-cvodes2 - ODE solver with sensistivity analysis (SUNDIALS library) libsundials-ida2 - differential-algebraic system solver (SUNDIALS library) libsundials-idas0 - IDA solver with sensitivity capabilities (SUNDIALS library) libsundials-kinsol1 - KINSOL solver (SUNDIALS library) libsundials-nvecserial0 - vector operations library (SUNDIALS library) libsundials-serial - SUit of Nonlinear and DIfferential/ALgebraic equation Solvers libsundials-serial-dev - SUNDIALS development files octave-sundials - SUNDIALS for octave Closes: 700525 Changes: sundials (2.5.0-2) unstable; urgency=low . * debian/rules: - Add -lblas -llapack -lm to LDFLAGS (closes: #700525) Checksums-Sha1: 7d6aa90c08a45ed2b451fd9f55a921f5c88937c9 1974 sundials_2.5.0-2.dsc 834865f4914b45687d7f15bfcf5a5020b012c735 64134 sundials_2.5.0-2.diff.gz 6965b58d1cc8e547190a9d4049ef4de185ad1f55 8310 libsundials-serial_2.5.0-2_amd64.deb b175b8742219e8bdef2e228e875f877b6bd9634a 61494 libsundials-cvode1_2.5.0-2_amd64.deb 01d70f7963bc350edb5a8983948d2c3186d7094a 99842 libsundials-cvodes2_2.5.0-2_amd64.deb 2a3ac9495bb5af24f34b5ec2ad6a758b1413f759 58052 libsundials-ida2_2.5.0-2_amd64.deb 1ca64955e3bb74657b4a373144e9c7d00833d2e6 96588 libsundials-idas0_2.5.0-2_amd64.deb 5c639d736c89fdcc24e2f059ae58bed68ebf27ba 46856 libsundials-kinsol1_2.5.0-2_amd64.deb 40623b9b833290a65b66be198e3636c9b1cb488f 16132 libsundials-nvecserial0_2.5.0-2_amd64.deb 024df81853d8123a45ad3f4576b707f968eed560 943102 libsundials-serial-dev_2.5.0-2_amd64.deb 95eed34e26d47205b941b5bfccb9dc95c03a54a3 378160 octave-sundials_2.5.0-2_amd64.deb Checksums-Sha256: bafa4e3091cb9567776bf000303e0a0ddcdb0a4149a72ff876a63763ff800b80 1974 sundials_2.5.0-2.dsc 067a209ac50ca3f6cc8e4c1058db839014fa3eee6c84ce3e6f8cb1deae8c8a16 64134 sundials_2.5.0-2.diff.gz 3e619f53af1cc673f25479884198cdcc3d5da6b2772e3f8442939542e8310d8e 8310 libsundials-serial_2.5.0-2_amd64.deb e5d632d1b1d109489f2837b1d39bb44d0250e2022fca4e66bc7660608a126cbb 61494 libsundials-cvode1_2.5.0-2_amd64.deb de64db7196cc4ef85147de15958b0910cfc2c3cb987153b1aef1f9956e14a975 99842 libsundials-cvodes2_2.5.0-2_amd64.deb f18a0a0f07725803e28dc198dd4690119290452f34b1a518b3c540219041d72b 58052 libsundials-ida2_2.5.0-2_amd64.deb 07f1e00c6a8f18c4e8b5cfba28d7ee917974a123f4512f4f14c47d5b1e260456 96588 libsundials-idas0_2.5.0-2_amd64.deb 3730fe1463f66a2cc2eaa6f68c7b24a7b5f71f6bb7cdc4e9444410c148402ab2 46856 libsundials-kinsol1_2.5.0-2_amd64.deb d6228aac7636de94e25bd2beb8b6d4fe41201594d758ed557c145e5b50cb1576 16132 libsundials-nvecserial0_2.5.0-2_amd64.deb 2ab1f58adfe662c881f7e8ba9e636abb441aee73fab03ebe7b216c2e9bd27fcb 943102 libsundials-serial-dev_2.5.0-2_amd64.deb 45866a395c14d582ebbea4eaa11690fd937cfcd14e61050bff131b40fd7ed023 378160 octave-sundials_2.5.0-2_amd64.deb Files: 6d2ba4e49004b57a9a15787cc44510b6 1974 libs optional sundials_2.5.0-2.dsc 3c8464a3d58b991fec11f7ce22c508cf 64134 libs optional sundials_2.5.0-2.diff.gz 1454fda673be0e12c908127dce3d979d 8310 libs optional libsundials-serial_2.5.0-2_amd64.deb ab92c3cc03349782d2d56723dcbd335c 61494 libs optional libsundials-cvode1_2.5.0-2_amd64.deb 85107f1a6b11850bfca1f7d6fd35ae06 99842 libs optional libsundials-cvodes2_2.5.0-2_amd64.deb 7309b3e1e778f36182070bf113805920 58052 libs optional libsundials-ida2_2.5.0-2_amd64.deb 8d704aef80f2a14dcf214f2100717471 96588 libs optional libsundials-idas0_2.5.0-2_amd64.deb bed647ac34ee9e6cdebb89120eb50439 46856 libs optional libsundials-kinsol1_2.5.0-2_amd64.deb 364a6d2146fba90be33a7d20fc7dc45e 16132 libs optional libsundials-nvecserial0_2.5.0-2_amd64.deb 66dff831f61c9f04cabcc7080753e894 943102 libdevel optional libsundials-serial-dev_2.5.0-2_amd64.deb 5a87777391fd2a10d432c51a2a27009e 378160 libs optional octave-sundials_2.5.0-2_amd64.deb -----BEGIN PGP SIGNATURE----- Version: GnuPG v1.4.12 (GNU/Linux) iEYEARECAAYFAlEfUVYACgkQiOXXM92JlhAXrwCgscOe8rd4j3eSzY64J1BwxKlt 7T0AniVOKNJJ8ZCoORnsNWuQjQcPfaSn =4Vf9 -----END PGP SIGNATURE-----
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