Hello,
I get the same configuration error. I don’t find the CMakeError file either
(maybe it is switched off with a flag?), but can give a few more details from
the CMake output.
I use a similar deal.II configuration: (cmake -DDEAL_II_CXX_FLAGS=-std=c++17
-DDEAL_II_WITH_MPI=ON -DDEAL_II_WITH_HDF5=ON -DDEAL_II_WITH_PETSC=ON
-DPETSC_DIR=$PETSC_DIR -DPETSC_ARCH=arch-darwin-c-debug
-DDEAL_II_WITH_SLEPC=ON -DSLEPC_DIR=$SLEPC_DIR -DDEAL_II_WITH_P4EST=ON
-DP4EST_DIR=$P4EST_DIR)
I get the following output (shortened a bit, if anything is missing let me
know!):
[…]
/opt/homebrew/Cellar/cmake/3.27.6/bin/cmake -E cmake_link_script
CMakeFiles/CheckCompilerSetupExec.dir/link.txt --verbose=1
/Library/Developer/CommandLineTools/usr/bin/c++ -arch arm64 -isysroot
/Library/Developer/CommandLineTools/SDKs/MacOSX14.0.sdk [....]
ld: warning: ignoring duplicate libraries: '-ldl', '-lm',
'/Users/flo/.local/lib/petsc/arch-darwin-c-debug/lib/libdmumps.a',
'/Users/flo/.local/lib/petsc/arch-darwin-c-debug/lib/libmumps_common.a',
'/Users/flo/.local/lib/petsc/arch-darwin-c-debug/lib/libpord.a',
'/opt/homebrew/Cellar/gcc/13.2.0/lib/gcc/current/gcc/aarch64-apple-darwin23/13/libemutls_w.a'
ld: warning: duplicate LC_RPATH are deprecated
('/opt/homebrew/Cellar/gcc/13.2.0/lib/gcc/current/gcc/aarch64-apple-darwin23/13')
ld: warning: duplicate LC_RPATH are deprecated
('/opt/homebrew/Cellar/gcc/13.2.0/lib/gcc/current/gcc')
ld: warning: duplicate LC_RPATH are deprecated
('/opt/homebrew/Cellar/gcc/13.2.0/lib/gcc/current')
ld: warning: duplicate LC_RPATH are deprecated
('/Users/flo/.local/lib/petsc/arch-darwin-c-debug/lib')
ld: warning: duplicate LC_RPATH are deprecated
('/opt/homebrew/Cellar/gcc/13.2.0/lib/gcc/current/gcc/aarch64-apple-darwin23/13')
ld: warning: duplicate LC_RPATH are deprecated
('/opt/homebrew/Cellar/gcc/13.2.0/lib/gcc/current/gcc')
ld: warning: duplicate LC_RPATH are deprecated
('/opt/homebrew/Cellar/gcc/13.2.0/lib/gcc/current')
ld: warning: duplicate LC_RPATH are deprecated
('/Users/flo/.local/lib/petsc/arch-darwin-c-debug/lib')
ld: multiple errors: duplicate LC_RPATH
'/opt/homebrew/Cellar/gcc/13.2.0/lib/gcc/current/gcc/aarch64-apple-darwin23/13'
in
'/Users/flo/.local/lib/petsc/arch-darwin-c-debug/lib/libscalapack.2.2.1.dylib';
duplicate LC_RPATH
'/opt/homebrew/Cellar/gcc/13.2.0/lib/gcc/current/gcc/aarch64-apple-darwin23/13'
in
'/Users/flo/.local/lib/petsc/arch-darwin-c-debug/lib/libscalapack.2.2.1.dylib'
clang: error: linker command failed with exit code 1 (use -v to see invocation)
gmake[2]: *** [CMakeFiles/CheckCompilerSetupExec.dir/build.make:167:
CheckCompilerSetupExec] Error 1
gmake[2]: Leaving directory
'/Users/flo/Documents/PhD/Code/sapphire/dealii-9.5.1/build/check_compiler_setup/DEAL_II_HAVE_USABLE_FLAGS_DEBUG'
gmake[1]: *** [CMakeFiles/Makefile2:86:
CMakeFiles/CheckCompilerSetupExec.dir/all] Error 2
gmake[1]: Leaving directory
'/Users/flo/Documents/PhD/Code/sapphire/dealii-9.5.1/build/check_compiler_setup/DEAL_II_HAVE_USABLE_FLAGS_DEBUG'
gmake: *** [Makefile:94: all] Error 2
CMake Error at cmake/setup_finalize.cmake:126 (message):
Configuration error: Cannot compile a test program with the final set of
compiler and linker flags:
CXX flags (DEBUG): -openmp-simd -ftemplate-depth=1024 -std=c++17
-ffp-exception-behavior=strict -Og -ggdb -Wa,--compress-debug-sections
LD flags (DEBUG): -ggdb
LIBRARIES (DEBUG): ;
Call Stack (most recent call first):
cmake/macros/macro_verbose_include.cmake:19 (include)
CMakeLists.txt:123 (verbose_include)
-- Configuring incomplete, errors occurred!
Some details on my setup: I use MacOS 14.0 (just updated) on a M1 MacBook
(arm64-apple-darwin23.0.0). My compiler is the `CommandLineTools` clang
compiler (Apple clang version 15.0.0). I installed gcc-13, cmake (and some
packages) with home-brew.
PETSc-v3.20.0, SLEPc-v3.20.0 and p4est-v2.8.5 installed in '~/.local/lib‘. I
try to compile the deal.II version 9.5.1.
I hope this gives sufficient information, and we are able to identify the
problem (probably either with PETSc or the linking of libraries).
Thank you in advance!
Best,
Florian
> Am 04.10.2023 um 06:39 schrieb Wolfgang Bangerth <bange...@colostate.edu>:
>
> On 10/3/23 19:44, Giselle Sosa Jones wrote:
>> **
>> I do not have this file in my CMakeFiles directory. I was looking for it in
>> the other directories, but could not find it...
>
> At least with my version of cmake (version 3.22), errors are written into
> CMakeFiles/CMakeError.log in the directory where you called cmake. (In my
> previous email, I had a file suffix of .txt, but it is really .log.) If you
> have a different cmake version, perhaps the error is elsewhere -- you'll have
> to search through files to see where compiler errors are recorded.
>
> I'm afraid there is little anyone can say about the specific reason why it
> doesn't work for you without that information :-(
>
> Best
> Wolfgang
>
> --
> ------------------------------------------------------------------------
> Wolfgang Bangerth email: bange...@colostate.edu
> www: http://www.math.colostate.edu/~bangerth/
>
>
> --
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