Hi Doug!

Your scenario indeed revealed a bug: Currently, we set and send 
`active_fe_indices` based on the refinement flags on the Triangulation 
object. However, p4est has the last word on deciding which cells will be 
refined -- and in your specific scenario p4est makes use of it. I came up 
with a fix that should resolve this issue. Thank you for providing us with 
this example!

I'll open a pull request once my local testsuite passes.

Marc

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