Dear all,

some additional information. Out of interest I switched back to the last 
release version of the deal.ii library 8.4.1 and made a run with this 
version. The problem is still there and even worse. I attached again the 
two log files for debug and release mode respectively.


Best
Dustin

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JobId thinkpad-lsx.site Wed Aug 31 11:14:21 2016
setup_intial_fe_distribution, wall time: 0.596235s.
DEAL::
DEAL::Memory used by block (0, 0) = 50144
DEAL::Memory used by block (0, 1) = 5904
DEAL::Memory used by block (0, 2) = 180504
DEAL::Memory used by block (1, 0) = 20909304
DEAL::Memory used by block (1, 1) = 344734528
DEAL::Memory used by block (1, 2) = 21246732
DEAL::Memory used by block (2, 0) = 261504
DEAL::Memory used by block (2, 1) = 424332
DEAL::Memory used by block (2, 2) = 86904
DEAL::
DEAL::Nonzero entries: 53353179
DEAL::
copy_sparsity_pattern, wall time: 3772.89s.
DEAL::   n_dofs dofhandler_m:       240
                 n_dofs dofhandler_s:       871215
                 n_dofs biorthogonal basis: 3615
                 n_dofs all:                875070

setup_system, wall time: 3801.87s.
Setup, wall time: 3802.46s.


+---------------------------------------------+------------+------------+
| Total wallclock time elapsed since start    |  3.81e+03s |            |
|                                             |            |            |
| Section                         | no. calls |  wall time | % of total |
+---------------------------------+-----------+------------+------------+
| Setup                           |         1 |  3.80e+03s |    1.e+02% |
| copy_sparsity_pattern           |         1 |  3.77e+03s |       99.% |
| setup_intial_fe_distribution    |         1 |     0.596s |     0.016% |
| setup_system                    |         1 |  3.80e+03s |    1.e+02% |
+---------------------------------+-----------+------------+------------+

JobId thinkpad-lsx.site Wed Aug 31 12:27:00 2016
setup_intial_fe_distribution, wall time: 0.19369s.
DEAL::
DEAL::Memory used by block (0, 0) = 50144
DEAL::Memory used by block (0, 1) = 5904
DEAL::Memory used by block (0, 2) = 180504
DEAL::Memory used by block (1, 0) = 20909304
DEAL::Memory used by block (1, 1) = 344734528
DEAL::Memory used by block (1, 2) = 21246732
DEAL::Memory used by block (2, 0) = 261504
DEAL::Memory used by block (2, 1) = 424332
DEAL::Memory used by block (2, 2) = 86904
DEAL::
DEAL::Nonzero entries: 53353179
DEAL::
copy_sparsity_pattern, wall time: 1176.15s.
DEAL::   n_dofs dofhandler_m:       240
                 n_dofs dofhandler_s:       871215
                 n_dofs biorthogonal basis: 3615
                 n_dofs all:                875070

setup_system, wall time: 1179.94s.
Setup, wall time: 1180.14s.


+---------------------------------------------+------------+------------+
| Total wallclock time elapsed since start    |  1.18e+03s |            |
|                                             |            |            |
| Section                         | no. calls |  wall time | % of total |
+---------------------------------+-----------+------------+------------+
| Setup                           |         1 |  1.18e+03s |    1.e+02% |
| copy_sparsity_pattern           |         1 |  1.18e+03s |    1.e+02% |
| setup_intial_fe_distribution    |         1 |     0.194s |     0.016% |
| setup_system                    |         1 |  1.18e+03s |    1.e+02% |
+---------------------------------+-----------+------------+------------+

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