Never mind, I found it. ;) Been up too long, apparently. On Thursday, October 11, 2012 10:24:55 AM UTC-7, Brian Craft wrote: > > On Thursday, October 11, 2012 9:11:44 AM UTC-7, Sean Corfield wrote: >> >> On Wed, Oct 10, 2012 at 9:43 PM, Brian Craft <craft...@gmail.com> wrote: >> >>> and I get "Insufficient bytes to decode frame" from gloss. I didn't >>> expect an error reading the table. What am I doing wrong? >> >> >> Source for read-table? >> > > Including all the functions it calls, it's about 150 lines. I'm trying to > pare it down to a simple example. If I replace the gloss.io/decode call > with a vector literal, it works. > > I also tried replacing the doseq with a dorun, to make the two cases more > similar. Here's the actual code for the dorun: > > (sql/with-connection db > (with-open [flat (io/writer "baylor_ER_fpkm_v2.flat.tbx")] > (dorun (map > ; #(println %) > #(.write flat (str (clojure.string/join "\t" [(% :chrom) (% > :start) (% :end) (score-str (% :scores))]) "\n")) > (slice-probes "genomic_baylor_ER_fpkm_v2" "chr1"))))) > > If I enable the println instead of the .write, it works. With the .write > gloss throws the error. I'm completely baffled as to how the function > called by map is affecting the sequence returned by (slice-probes). > > Can anyone spin a story here that would explain how this is possible? >
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