Dear Yahui, It is possible to set the B-factor (temperature factor) for all atoms in a residue at once using the residue info dialogue in Coot (Measures>Residue Info... in Coot 0.9). You would still have to go through residue by residue, though. For something more automated, you could look into scripting changes using command line text editing of the PDB files. Cheers, Peter Smyth Postdoc scientist, SEC Group European XFEL
-----Original Message----- From: Hui <butterflycam...@gmail.com> To: CCP4BB <CCP4BB@JISCMAIL.AC.UK> Date: Monday, 13 January 2025 16:02 CET Subject: [ccp4bb] replacing B-factor column and color accordingly Happy New Year, everyone! I am looking for a PDB editing tool to replace the B-factors numbers with another column of numbers, then color the structure by pseudo-B-factors in ChimeraX. All the atoms of one individual residue will have the same number at the B-factor column. I can possibly edit the coordinate manually atom by atom, which is not very fun to do. Does anybody know of any programme doing this process? Thanks a lot! Kind regards, Yahui To unsubscribe from the CCP4BB list, click the following link: https://www.jiscmail.ac.uk/cgi-bin/WA-JISC.exe?SUBED1=CCP4BB&A=1 ######################################################################## To unsubscribe from the CCP4BB list, click the following link: https://www.jiscmail.ac.uk/cgi-bin/WA-JISC.exe?SUBED1=CCP4BB&A=1 This message was issued to members of www.jiscmail.ac.uk/CCP4BB, a mailing list hosted by www.jiscmail.ac.uk, terms & conditions are available at https://www.jiscmail.ac.uk/policyandsecurity/
