Dear Vitali, I used to do it with Stride server.
https://webclu.bio.wzw.tum.de/cgi-bin/stride/stridecgi.py Hope this helps, Best wishes, Marc https://webclu.bio.wzw.tum.de/cgi-bin/stride/stridecgi.py — Marc GRAILLE, PhD DR1-CNRS Head of the team: “Translation and degradation of eukaryotic mRNAs” Laboratoire de Biologie Structurale de la Cellule (BIOC); UMR7654; CNRS ÉCOLE POLYTECHNIQUE 91128 PALAISEAU CEDEX FRANCE 📞: +33 (0)1 69 33 48 90 https://portail.polytechnique.edu/bioc/en/research/coupling-between-translation-and-mrna-degradation-eukaryotes Responses to emails are not expected outside of your normal working hours.  > Le 13 nov. 2024 à 13:14, Vitali James <jirivit...@gmail.com> a écrit : > > Dear User, > Is there any tool that can assign the secondary structure to the sequence of > protein in the PDB. > In the past I have used a 2Struc: the secondary structure server, but it's > not available any more. > Is there any easy way to list the sequence and ss below the sequence of > provided PDB models. > best > J. Vitali > > To unsubscribe from the CCP4BB list, click the following link: > https://www.jiscmail.ac.uk/cgi-bin/WA-JISC.exe?SUBED1=CCP4BB&A=1 > ######################################################################## To unsubscribe from the CCP4BB list, click the following link: https://www.jiscmail.ac.uk/cgi-bin/WA-JISC.exe?SUBED1=CCP4BB&A=1 This message was issued to members of www.jiscmail.ac.uk/CCP4BB, a mailing list hosted by www.jiscmail.ac.uk, terms & conditions are available at https://www.jiscmail.ac.uk/policyandsecurity/
