Hello, You can use phenix.fetch_pdb to get the files and phenix.pdb.biomt_reconstruction command-line tools to get biological assemblies. Depending on your need you can either go with bash/csh scripting calling command-line tools or with python calling functions from CCTBX. Let me know if you need help with any of these.
Best regards, Oleg Sobolev. On Sun, Jul 10, 2022 at 9:31 PM Abhilasha Thakur <[email protected]> wrote: > Hello, > > I have a long list of PDB ids and I needed the all the biological assembly > for each PDB Id, so in this case how I can get these biological assembly in > PDB format. > Please guide me how to get these assemblies, manually it wouldn't be > possible for each PDB I'd. > > > > Thankyou > > ------------------------------ > > To unsubscribe from the CCP4BB list, click the following link: > https://www.jiscmail.ac.uk/cgi-bin/WA-JISC.exe?SUBED1=CCP4BB&A=1 > ######################################################################## To unsubscribe from the CCP4BB list, click the following link: https://www.jiscmail.ac.uk/cgi-bin/WA-JISC.exe?SUBED1=CCP4BB&A=1 This message was issued to members of www.jiscmail.ac.uk/CCP4BB, a mailing list hosted by www.jiscmail.ac.uk, terms & conditions are available at https://www.jiscmail.ac.uk/policyandsecurity/
