Dear CCP4 bulletin board, I was wondering if there are any tools to determine the RMSD of the entire molecule (two domains) when only aligning one domain, the point i'm trying to make is a variation in domain positioning relative to one another but I'd like to quantify it. LSQ alignment in coot reports RMSD for the aligned porition only, as does the alignment tools on ccp4 cloud (unless i've missed a feature)
Any advice would be greatly appreciated. Kind regards, Kyle ######################################################################## To unsubscribe from the CCP4BB list, click the following link: https://www.jiscmail.ac.uk/cgi-bin/WA-JISC.exe?SUBED1=CCP4BB&A=1 This message was issued to members of www.jiscmail.ac.uk/CCP4BB, a mailing list hosted by www.jiscmail.ac.uk, terms & conditions are available at https://www.jiscmail.ac.uk/policyandsecurity/
