Yes, you can use DSSP 4.0 (https://github.com/PDB-REDO/dssp) to directly annotate your structure model in PDB or mmCIF format. The latter is recommended.
Cheers, Robbie > -----Original Message----- > From: CCP4 bulletin board <CCP4BB@JISCMAIL.AC.UK> On Behalf Of Neno > Vuksanovic > Sent: Thursday, September 16, 2021 22:36 > To: CCP4BB@JISCMAIL.AC.UK > Subject: [ccp4bb] PDB file secondary structure annotations > > Dear All, > > I noticed that files available in the Protein Data Bank contain secondary > structure information which allows for them to be imported in a program such > as BioRender in order to make structural figures. However, the PDB files > generated by PHENIX for structures that I haven't deposited yet do not contain > such information so BioRender displays them as coils. Is there an easy way to > add secondary structure information to a PDB file? > > Best Regards, > Neno > > > ________________________________ > > > To unsubscribe from the CCP4BB list, click the following link: > https://www.jiscmail.ac.uk/cgi-bin/WA-JISC.exe?SUBED1=CCP4BB&A=1 ######################################################################## To unsubscribe from the CCP4BB list, click the following link: https://www.jiscmail.ac.uk/cgi-bin/WA-JISC.exe?SUBED1=CCP4BB&A=1 This message was issued to members of www.jiscmail.ac.uk/CCP4BB, a mailing list hosted by www.jiscmail.ac.uk, terms & conditions are available at https://www.jiscmail.ac.uk/policyandsecurity/
