Re: [ccp4bb] visual mask editor - why

[Boaz Shaanan]

Hi Bernhard, Did you consider trying 'polder' in the phenix package? Boaz Boaz Shaanan, Ph.D. Department of Life Sciences Ben Gurion University of the Negev Beer Sheva Israel On May 28, 2020 21:17, Bernhard Rupp <hofkristall...@gmail.com> wrote: Maybe I should explain an example: Say coot detects an unmodelled blob (maybe a ligand). Now, I would like to do a number of things without biasing towards a model. Like comparing these map regions, excluding intrusion of a solvent mask, etc.   Now could coot for example just generate a mask around what it already knows are blobs?   Possible useful items could be a solvent mask not including that regions, or a density map that includes only features with a certain boundary around that blob.   I pilfered some kludges together from different sources, but let’s just say inelegant would be a compliment.   Best, BR ------------------------ Brief question: Does something like a visual density mask editor exist? Thx, BR ------------------------------------------------------ Bernhard Rupp http://www.hofkristallamt.org/ b...@hofkristallamt.org +1 925 209 7429 +43 676 571 0536 ------------------------------------------------------ Many plausible ideas vanish at the presence of thought ------------------------------------------------------   To unsubscribe from the CCP4BB list, click the following link: https://www.jiscmail.ac.uk/cgi-bin/webadmin?SUBED1=CCP4BB&A=1 To unsubscribe from the CCP4BB list, click the following link: https://www.jiscmail.ac.uk/cgi-bin/webadmin?SUBED1=CCP4BB&A=1