I thought the addition of " ..." around file names got round this problem
eg "This_is_Mine.pdb" and "That is Yours.pdb" Eleanor On 3 June 2014 13:15, Eugene Krissinel <eugene.krissi...@stfc.ac.uk> wrote: > I am afraid that it is us who will need to conform eventually :), same to > say about "Program Files (x86)" and the overall culture in Windows, the > system where some 40% (!!!!) of CCP4 users have chosen to work. > > Eugene > > > On 3 Jun 2014, at 13:03, Mark J van Raaij wrote: > > > completely agree with avoiding spaces in paths and file names, but > Google Drive is very handy for sharing files, so every once in a while I > forget to move a file someone shares with me before running Unix programs > on it and get strange errors. Depending on how awake one is at the time > finding out the source can be time-consuming...Google should really remove > the space! > > > > Mark J van Raaij > > Lab 20B > > Dpto de Estructura de Macromoleculas > > Centro Nacional de Biotecnologia - CSIC > > c/Darwin 3 > > E-28049 Madrid, Spain > > tel. (+34) 91 585 4616 > > http://www.cnb.csic.es/~mjvanraaij > > > > > > > > > > > > On 3 Jun 2014, at 13:47, Eugene Krissinel wrote: > > > >> I take this chance to to confirm once more, as publicly as possible, > that file paths with spaces are discouraged in today's CCP4. This > inconvenience originates from ancient times in computing when good half of > CCP4 was written and when spaces were disallowed on file system nodes. > >> > >> Please take a notice of this fact as CCP4 core still receives (albeit > infrequent) bug reports, where surprising behaviour is due to using file > paths with white spaces. > >> > >> Fixing this has proved to be a hard problem, purely because of > technical choices made quite a number of years ago. But good news are that > this limitation will be removed in new CCP4 Gui under development. > >> > >> Eugene > >> > >> On 3 Jun 2014, at 08:23, Mark J van Raaij wrote: > >> > >>> This also occurred to me once where the file path had a space,(/Google > Drive/), when I moved the file somewhere else it worked. I was using > baverage from the CCP4i GUI. > >>> > >>> Mark J van Raaij > >>> Lab 20B > >>> Dpto de Estructura de Macromoleculas > >>> Centro Nacional de Biotecnologia - CSIC > >>> c/Darwin 3 > >>> E-28049 Madrid, Spain > >>> tel. (+34) 91 585 4616 > >>> http://www.cnb.csic.es/~mjvanraaij > >>> > >>> > >>> > >>> > >>> > >>> On 3 Jun 2014, at 09:20, Tim Gruene wrote: > >>> > >>>> Dear Bing, > >>>> > >>>> can you post the exact command you were using, please? Also please > check > >>>> with a different PDB file. In case you are using baverage from the > >>>> command line, can you make sure you are actually using the program > from > >>>> ccp4 by typing 'which baverage' at the command prompt? > >>>> > >>>> Regards. > >>>> Tim > >>>> > >>>> On 06/02/2014 10:16 PM, Wang, Bing wrote: > >>>>> > >>>>> Hi CCP4, > >>>>> > >>>>> Recently when I input my pdb file and run the baverage in the ccp4 > suit to check the temperature factor, it always tell me "No tables were > fund in this file." Could you tell me how to fix this problem? Or is there > another software instead of baverage I could use to check the temperature > factor? > >>>>> > >>>>> Thanks! > >>>>> > >>>>> Bing > >>>>> > >>>> > >>>> -- > >>>> Dr Tim Gruene > >>>> Institut fuer anorganische Chemie > >>>> Tammannstr. 4 > >>>> D-37077 Goettingen > >>>> > >>>> GPG Key ID = A46BEE1A > >>>> > >> > >> > >> -- > >> Scanned by iCritical. > >> > > > > > -- > Scanned by iCritical. > >
